Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 52714562 . A C CCDS12849.1:NM_014225.5:c.320aAg>aCg_NP_055040.2:p.107K>T Homo sapiens protein phosphatase 2 scaffold subunit Aalpha (PPP2R1A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2ie3 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 LYS A:107 A:107 41.0 0.205 H -52.6 -39.5 41.0 0.205 0.0
2ie4 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 LYS A:107 A:107 47.0 0.235 H -52.3 -37.0 47.0 0.235 0.0 HOH
 7.413
 O
 O
2npp 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 LYS A:107 A:107 53.0 0.265 H -61.5 -47.4 NA NA NA
LYS D:107 D:107 51.0 0.255 H -52.0 -49.5 51.0 0.255 0.0
3k7v 1 P30153 100.0 0.0 X-RAY
 2009-11-03 LYS A:107 A:107 45.0 0.225 H -54.4 -43.5 45.0 0.225 0.0 HOH
 7.138
 O
 O
3k7w 1 P30153 100.0 0.0 X-RAY
 2009-11-03 LYS A:107 A:107 42.0 0.21 H -48.5 -57.2 42.0 0.21 0.0
6nts 1 P30153 100.0 0.0 EM
 2020-05-06 LYS A:107 A:107 81.0 0.405 H -64.4 -37.5 81.0 0.405 0.0
7cun 10 P30153 100.0 0.0 EM
 2020-11-25 LYS J:107 P:107 74.0 0.37 H -61.5 -38.9 74.0 0.37 0.0
7k36 1 P30153 100.0 0.0 EM
 2021-03-10 LYS A:107 A:107 20.0 NA H -61.3 -33.0 20.0 NA NA
7pks 31 P30153 100.0 0.0 EM
 2021-12-08 LYS EA:107 p:107 40.0 0.2 H -65.0 -42.7 40.0 0.2 0.0
2iae 1 Q76MZ3 99.83 0.0 X-RAY
 2006-12-26 LYS A:107 A:107 60.0 0.3 H -76.1 -51.5 60.0 0.3 0.0
LYS D:107 D:107 43.0 0.215 H -70.8 -44.6 NA NA NA
2pf4 1 Q76MZ3 99.83 0.0 X-RAY
 2007-08-07 LYS A:107 A:107 43.0 0.215 H -68.5 -42.0 43.0 0.215 0.0
LYS B:107 B:107 46.0 0.23 H -64.8 -47.7 NA NA NA
LYS C:107 C:107 50.0 0.25 H -65.2 -33.7 NA NA NA
LYS D:107 D:107 42.0 0.21 H -73.7 -36.8 NA NA NA
1b3u 1 P30153 100.0 0.0 X-RAY
 1999-04-12 LYS A:106 A:106 55.0 0.275 H -67.6 -42.5 55.0 0.275 0.0 HOH
 4.612
 NZ
 O
LYS B:106 B:106 40.0 0.2 H -68.8 -41.1 NA NA NA
3fga 1 Q76MZ3 99.83 0.0 X-RAY
 2009-09-22 LYS A:106 A:107 53.0 0.265 H -59.8 -44.0 53.0 0.265 0.0 HOH
 3.729
 O
 O
6ef4 1 Q76MZ3 99.66 0.0 X-RAY
 2019-06-26 LYS A:108 A:107 50.0 0.25 H -93.3 -34.0 50.0 0.25 0.0
6iur 1 P30153 100.0 0.0 X-RAY
 2019-12-04 LYS A:105 A:107 61.0 0.305 H -75.2 -33.2 61.0 0.305 0.0
LYS B:105 B:107 53.0 0.265 H -69.2 -36.1 53.0 0.265 0.0
LYS E:105 E:107 51.0 0.255 H -65.9 -36.9 NA NA NA
LYS F:105 F:107 51.0 0.255 H -73.8 -35.3 NA NA NA
2nyl 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 LYS A:100 A:107 54.0 0.27 H -66.4 -35.7 54.0 0.27 0.0
LYS D:100 D:107 51.0 0.255 H -74.1 -42.6 NA NA NA
2nym 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 LYS A:100 A:107 53.0 0.265 H -69.8 -38.0 53.0 0.265 0.0
LYS D:100 D:107 52.0 0.26 H -74.3 -37.9 NA NA NA
4i5l 1 P30153 99.66 0.0 X-RAY
 2013-05-08 LYS A:102 A:107 40.0 0.2 H -66.2 -38.8 40.0 0.2 0.0 HOH
 3.384
 CD
 O
LYS D:102 D:107 49.0 0.245 H -61.5 -43.0 NA NA NA
4i5n 1 P30153 99.66 0.0 X-RAY
 2013-05-08 LYS A:102 A:107 48.0 0.24 H -61.2 -34.9 48.0 0.24 0.0
LYS D:102 D:107 40.0 0.2 H -60.9 -44.4 NA NA NA
3dw8 1 P30153 100.0 0.0 X-RAY
 2008-10-07 LYS A:100 A:107 47.0 0.235 H -57.6 -60.2 47.0 0.235 0.0
LYS D:100 D:107 44.0 0.22 H -66.8 -48.3 NA NA NA
5w0w 1 P30153 100.0 0.0 X-RAY
 2018-01-17 LYS A:103 A:107 45.0 0.225 H -59.9 -44.7 45.0 0.225 0.0
LYS D:103 D:107 47.0 0.235 H -75.2 -29.9 NA NA NA
LYS G:103 G:107 47.0 0.235 H -73.7 -37.1 NA NA NA
LYS J:103 J:107 49.0 0.245 H -63.6 -29.1 NA NA NA
2pkg 1 P30153 100.0 0.0 X-RAY
 2007-05-15 LYS A:98 A:107 60.0 0.3 H -53.4 -58.2 60.0 0.3 0.0
LYS B:98 B:107 52.0 0.26 H -53.3 -59.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p30153-f1 1 P30153 100.0 0.0 LYS A:107 A:107 39.0 0.195 H -65.7 -39.1
af-p30154-f1 1 P30154 86.4 0.0 LYS A:119 A:119 45.0 0.225 H -68.8 -36.9