Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 52714624 | . | T | A | CCDS12849.1:NM_014225.5:c.382Ttt>Att_NP_055040.2:p.128F>I | Homo sapiens protein phosphatase 2 scaffold subunit Aalpha (PPP2R1A), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2ie3 | 1 | Q96DH3 | 100.0 | 0.0 |
X-RAY |
2006-11-07 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -66.2 | -63.7 | 0.0 | 0.0 | 0.0 | ||||||
2ie4 | 1 | Q96DH3 | 100.0 | 0.0 |
X-RAY |
2006-11-07 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -69.4 | -61.9 | 0.0 | 0.0 | 0.0 |
HOH |
9.822 |
CZ |
O |
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2npp | 1 | Q96DH3 | 100.0 | 0.0 |
X-RAY |
2006-12-12 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -71.0 | -53.2 | NA | NA | NA | ||||||
PHE | D:128 | D:128 | 0.0 | 0.0 | I | -70.1 | -58.3 | 0.0 | 0.0 | 0.0 | |||||||||||||
3k7v | 1 | P30153 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -69.0 | -65.6 | 0.0 | 0.0 | 0.0 |
HOH |
9.645 |
CZ |
O |
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3k7w | 1 | P30153 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -74.9 | -65.0 | 0.0 | 0.0 | 0.0 |
HOH |
9.728 |
CE2 |
O |
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6nts | 1 | P30153 | 100.0 | 0.0 |
EM |
2020-05-06 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -68.1 | -42.0 | 0.0 | 0.0 | 0.0 | ||||||
7cun | 10 | P30153 | 100.0 | 0.0 |
EM |
2020-11-25 | PHE | J:128 | P:128 | 12.0 | 0.057 | I | -75.1 | -24.9 | 12.0 | 0.057 | 0.0 | ||||||
7k36 | 1 | P30153 | 100.0 | 0.0 |
EM |
2021-03-10 | PHE | A:128 | A:128 | 21.0 | NA | H | -68.5 | -20.1 | 21.0 | NA | NA | ||||||
7pks | 31 | P30153 | 100.0 | 0.0 |
EM |
2021-12-08 | PHE | EA:128 | p:128 | 0.0 | 0.0 | I | -76.5 | -32.1 | 0.0 | 0.0 | 0.0 | ||||||
2iae | 1 | Q76MZ3 | 99.83 | 0.0 |
X-RAY |
2006-12-26 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -63.2 | -47.0 | 0.0 | 0.0 | 0.0 | ||||||
PHE | D:128 | D:128 | 0.0 | 0.0 | I | -64.9 | -37.2 | NA | NA | NA | |||||||||||||
2pf4 | 1 | Q76MZ3 | 99.83 | 0.0 |
X-RAY |
2007-08-07 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -56.6 | -60.4 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:128 | B:128 | 0.0 | 0.0 | I | -64.4 | -53.6 | NA | NA | NA | |||||||||||||
PHE | C:128 | C:128 | 0.0 | 0.0 | I | -72.5 | -48.4 | NA | NA | NA | |||||||||||||
PHE | D:128 | D:128 | 0.0 | 0.0 | I | -64.3 | -49.2 | NA | NA | NA | |||||||||||||
1b3u | 1 | P30153 | 100.0 | 0.0 |
X-RAY |
1999-04-12 | PHE | A:127 | A:127 | 0.0 | 0.0 | I | -65.8 | -46.3 | 0.0 | 0.0 | 0.0 |
HOH |
5.097 |
N |
O |
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PHE | B:127 | B:127 | 0.0 | 0.0 | I | -58.0 | -52.4 | NA | NA | NA | |||||||||||||
3fga | 1 | Q76MZ3 | 99.83 | 0.0 |
X-RAY |
2009-09-22 | PHE | A:127 | A:128 | 0.0 | 0.0 | I | -61.9 | -53.6 | 0.0 | 0.0 | 0.0 |
HOH |
8.524 |
CE2 |
O |
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6ef4 | 1 | Q76MZ3 | 99.66 | 0.0 |
X-RAY |
2019-06-26 | PHE | A:129 | A:128 | 0.0 | 0.0 | I | -73.8 | -43.7 | 0.0 | 0.0 | 0.0 | ||||||
6iur | 1 | P30153 | 100.0 | 0.0 |
X-RAY |
2019-12-04 | PHE | A:126 | A:128 | 0.0 | 0.0 | I | -79.6 | -56.1 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:126 | B:128 | 0.0 | 0.0 | I | -80.0 | -34.5 | 0.0 | 0.0 | 0.0 | |||||||||||||
PHE | E:126 | E:128 | 0.0 | 0.0 | I | -80.9 | -34.0 | NA | NA | NA | |||||||||||||
PHE | F:126 | F:128 | 0.0 | 0.0 | I | -77.8 | -55.3 | NA | NA | NA | |||||||||||||
2nyl | 1 | Q96DH3 | 100.0 | 0.0 |
X-RAY |
2006-12-12 | PHE | A:121 | A:128 | 0.0 | 0.0 | H | -51.5 | -67.4 | 0.0 | 0.0 | 0.0 | ||||||
PHE | D:121 | D:128 | 0.0 | 0.0 | H | -55.4 | -71.2 | NA | NA | NA | |||||||||||||
2nym | 1 | Q96DH3 | 100.0 | 0.0 |
X-RAY |
2006-12-12 | PHE | A:121 | A:128 | 0.0 | 0.0 | H | -73.2 | -47.7 | 0.0 | 0.0 | 0.0 | ||||||
PHE | D:121 | D:128 | 0.0 | 0.0 | I | -68.5 | -60.7 | NA | NA | NA | |||||||||||||
4i5l | 1 | P30153 | 99.66 | 0.0 |
X-RAY |
2013-05-08 | PHE | A:123 | A:128 | 0.0 | 0.0 | I | -72.8 | -50.0 | 0.0 | 0.0 | 0.0 |
HOH |
4.925 |
N |
O |
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PHE | D:123 | D:128 | 0.0 | 0.0 | I | -71.6 | -50.8 | NA | NA | NA | |||||||||||||
4i5n | 1 | P30153 | 99.66 | 0.0 |
X-RAY |
2013-05-08 | PHE | A:123 | A:128 | 0.0 | 0.0 | I | -66.9 | -43.0 | 0.0 | 0.0 | 0.0 |
HOH |
8.430 |
N |
O |
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PHE | D:123 | D:128 | 0.0 | 0.0 | I | -77.8 | -43.0 | NA | NA | NA | |||||||||||||
3dw8 | 1 | P30153 | 100.0 | 0.0 |
X-RAY |
2008-10-07 | PHE | A:121 | A:128 | 0.0 | 0.0 | I | -59.9 | -36.1 | 0.0 | 0.0 | 0.0 | ||||||
PHE | D:121 | D:128 | 0.0 | 0.0 | I | -65.2 | -36.5 | NA | NA | NA | |||||||||||||
5w0w | 1 | P30153 | 100.0 | 0.0 |
X-RAY |
2018-01-17 | PHE | A:124 | A:128 | 0.0 | 0.0 | I | -84.9 | -43.2 | 0.0 | 0.0 | 0.0 | ||||||
PHE | D:124 | D:128 | 0.0 | 0.0 | I | -82.8 | -49.4 | NA | NA | NA | |||||||||||||
PHE | G:124 | G:128 | 0.0 | 0.0 | I | -91.9 | -42.7 | NA | NA | NA | |||||||||||||
PHE | J:124 | J:128 | 0.0 | 0.0 | I | -83.4 | -38.5 | NA | NA | NA | |||||||||||||
2pkg | 1 | P30153 | 100.0 | 0.0 |
X-RAY |
2007-05-15 | PHE | A:119 | A:128 | 0.0 | 0.0 | I | -53.8 | -83.6 | 0.0 | 0.0 | 0.0 | ||||||
PHE | B:119 | B:128 | 0.0 | 0.0 | I | -69.0 | -68.0 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p30153-f1 | 1 | P30153 | 100.0 | 0.0 | PHE | A:128 | A:128 | 0.0 | 0.0 | I | -70.8 | -47.6 | |
af-p30154-f1 | 1 | P30154 | 86.4 | 0.0 | PHE | A:140 | A:140 | 0.0 | 0.0 | I | -77.7 | -45.3 |