Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 52715971 . C A CCDS12849.1:NM_014225.5:c.536cCc>cAc_NP_055040.2:p.179P>H Homo sapiens protein phosphatase 2 scaffold subunit Aalpha (PPP2R1A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2ie3 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 PRO A:179 A:179 42.0 0.29 H -63.0 -47.6 42.0 0.29 0.0
2ie4 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 PRO A:179 A:179 43.0 0.297 H -63.7 -45.1 43.0 0.297 0.0 HOH
 3.734
 CG
 O
2npp 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 PRO A:179 A:179 25.0 0.172 H -59.0 -42.4 NA NA NA
PRO D:179 D:179 25.0 0.172 H -57.0 -41.6 4.0 0.028 0.144 E:Q13362:0.145
3k7v 1 P30153 100.0 0.0 X-RAY
 2009-11-03 PRO A:179 A:179 44.0 0.303 H -51.6 -44.9 44.0 0.303 0.0 HOH
 8.781
 CG
 O
3k7w 1 P30153 100.0 0.0 X-RAY
 2009-11-03 PRO A:179 A:179 43.0 0.297 H -48.5 -48.9 43.0 0.297 0.0 HOH
 9.008
 CG
 O
6nts 1 P30153 100.0 0.0 EM
 2020-05-06 PRO A:179 A:179 46.0 0.317 H -77.0 -24.3 15.0 0.103 0.214 B:Q15172:0.214
7cun 10 P30153 100.0 0.0 EM
 2020-11-25 PRO J:179 P:179 16.0 0.11 H -75.0 3.0 16.0 0.11 0.0
7k36 1 P30153 100.0 0.0 EM
 2021-03-10 PRO A:179 A:179 84.0 NA H -54.4 -34.0 84.0 NA NA
7pks 31 P30153 100.0 0.0 EM
 2021-12-08 PRO EA:179 p:179 31.0 0.214 H -75.7 -33.7 31.0 0.214 0.0
2iae 1 Q76MZ3 99.83 0.0 X-RAY
 2006-12-26 PRO A:179 A:179 28.0 0.193 H -68.0 -19.2 6.0 0.041 0.152 B:Q13362:0.152
PRO D:179 D:179 28.0 0.193 H -71.1 -27.8 NA NA NA
2pf4 1 Q76MZ3 99.83 0.0 X-RAY
 2007-08-07 PRO A:179 A:179 32.0 0.221 H -45.0 -35.0 3.0 0.021 0.2 E:Q9W9P1:0.2
PRO B:179 B:179 32.0 0.221 H -63.6 -31.3 NA NA NA
PRO C:179 C:179 31.0 0.214 H -55.1 -40.9 NA NA NA
PRO D:179 D:179 24.0 0.166 H -59.3 -50.4 NA NA NA
1b3u 1 P30153 100.0 0.0 X-RAY
 1999-04-12 PRO A:178 A:178 40.0 0.276 H -54.2 -44.1 40.0 0.276 0.0 HOH
 3.803
 CD
 O
PRO B:178 B:178 39.0 0.269 H -54.2 -40.4 NA NA NA
3fga 1 Q76MZ3 99.83 0.0 X-RAY
 2009-09-22 PRO A:178 A:179 32.0 0.221 H -63.6 -19.1 7.0 0.048 0.173 B:Q13362:0.172
 HOH
 3.290
 CG
 O
6ef4 1 Q76MZ3 99.66 0.0 X-RAY
 2019-06-26 ARG A:180 A:179 116.0 0.516 H -71.3 -29.5 116.0 0.516 0.0
6iur 1 P30153 100.0 0.0 X-RAY
 2019-12-04 PRO A:177 A:179 36.0 0.248 H -63.6 -23.5 36.0 0.248 0.0
PRO B:177 B:179 29.0 0.2 H -62.4 -25.7 29.0 0.2 0.0
PRO E:177 E:179 33.0 0.228 H -63.9 -29.7 NA NA NA
PRO F:177 F:179 39.0 0.269 H -61.6 -20.9 NA NA NA
2nyl 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 PRO A:172 A:179 26.0 0.179 H -45.3 -51.3 3.0 0.021 0.158 B:Q13362:0.159
PRO D:172 D:179 24.0 0.166 H -50.6 -58.6 NA NA NA
2nym 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 PRO A:172 A:179 27.0 0.186 H -47.0 -48.0 3.0 0.021 0.165 B:Q13362:0.166
PRO D:172 D:179 30.0 0.207 H -52.1 -58.0 NA NA NA
4i5l 1 P30153 99.66 0.0 X-RAY
 2013-05-08 PRO A:174 A:179 43.0 0.297 H -63.3 -30.3 18.0 0.124 0.173 B:Q9Y5P8+Q99741:0.172
 PEG
HOH
 9.824
3.821
 N
CG
 O1
O
PRO D:174 D:179 38.0 0.262 H -56.1 -36.2 NA NA NA
4i5n 1 P30153 99.66 0.0 X-RAY
 2013-05-08 PRO A:174 A:179 30.0 0.207 H -60.0 -30.2 23.0 0.159 0.048 B:Q9Y5P8+Q99741:0.048
 HOH
 8.793
 CB
 O
PRO D:174 D:179 31.0 0.214 H -66.0 -30.9 NA NA NA
3dw8 1 P30153 100.0 0.0 X-RAY
 2008-10-07 PRO A:172 A:179 34.0 0.234 H -63.2 -23.1 4.0 0.028 0.206 B:P63151:0.207
PRO D:172 D:179 39.0 0.269 H -69.6 -26.3 NA NA NA
5w0w 1 P30153 100.0 0.0 X-RAY
 2018-01-17 PRO A:175 A:179 18.0 0.124 H -77.4 -29.3 8.0 0.055 0.069 B:Q8BH58:0.069
PRO D:175 D:179 35.0 0.241 H -62.5 -52.6 NA NA NA
PRO G:175 G:179 55.0 0.379 H -62.5 -56.1 NA NA NA
PRO J:175 J:179 36.0 0.248 H -61.6 -39.5 NA NA NA
2pkg 1 P30153 100.0 0.0 X-RAY
 2007-05-15 PRO A:170 A:179 26.0 0.179 H -46.7 -41.6 1.0 0.007 0.172 C:P03081:0.172
PRO B:170 B:179 21.0 0.145 H -62.4 -41.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p30153-f1 1 P30153 100.0 0.0 PRO A:179 A:179 35.0 0.241 H -53.2 -34.7
af-p30154-f1 1 P30154 86.4 0.0 PRO A:191 A:191 47.0 0.324 H -56.2 -34.0