Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 52724301 . C A CCDS12849.1:NM_014225.5:c.1433gCc>gAc_NP_055040.2:p.478A>D Homo sapiens protein phosphatase 2 scaffold subunit Aalpha (PPP2R1A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2ie3 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 ALA A:478 A:478 0.0 0.0 H -57.9 -63.2 0.0 0.0 0.0
2ie4 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 ALA A:478 A:478 0.0 0.0 H -64.4 -41.0 0.0 0.0 0.0
2npp 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 ALA A:478 A:478 0.0 0.0 H -69.9 -46.3 NA NA NA
ALA D:478 D:478 0.0 0.0 H -66.4 -44.7 0.0 0.0 0.0
3k7v 1 P30153 100.0 0.0 X-RAY
 2009-11-03 ALA A:478 A:478 0.0 0.0 H -65.8 -55.1 0.0 0.0 0.0
3k7w 1 P30153 100.0 0.0 X-RAY
 2009-11-03 ALA A:478 A:478 0.0 0.0 H -68.3 -44.0 0.0 0.0 0.0
6nts 1 P30153 100.0 0.0 EM
 2020-05-06 ALA A:478 A:478 2.0 0.017 I -59.2 -64.0 2.0 0.017 0.0
7cun 10 P30153 100.0 0.0 EM
 2020-11-25 ALA J:478 P:478 4.0 0.035 T -84.9 3.8 4.0 0.035 0.0
7k36 1 P30153 100.0 0.0 EM
 2021-03-10 ALA A:478 A:478 2.0 0.017 H -58.4 -62.8 2.0 0.017 0.0
7pks 31 P30153 100.0 0.0 EM
 2021-12-08 ALA EA:478 p:478 1.0 0.009 I -58.4 -52.1 1.0 0.009 0.0
2iae 1 Q76MZ3 99.83 0.0 X-RAY
 2006-12-26 ALA A:478 A:478 0.0 0.0 I -60.0 -43.8 0.0 0.0 0.0
ALA D:478 D:478 0.0 0.0 H -58.0 -50.3 NA NA NA
2pf4 1 Q76MZ3 99.83 0.0 X-RAY
 2007-08-07 ALA A:478 A:478 1.0 0.009 H -45.6 -54.3 1.0 0.009 0.0
ALA B:478 B:478 0.0 0.0 I -61.4 -39.8 NA NA NA
ALA C:478 C:478 0.0 0.0 I -65.8 -74.8 NA NA NA
ALA D:478 D:478 3.0 0.026 I -60.7 -56.5 NA NA NA
1b3u 1 P30153 100.0 0.0 X-RAY
 1999-04-12 ALA A:477 A:477 0.0 0.0 I -64.7 -48.5 0.0 0.0 0.0 HOH
 5.386
 N
 O
ALA B:477 B:477 0.0 0.0 H -56.9 -41.2 NA NA NA
3fga 1 Q76MZ3 99.83 0.0 X-RAY
 2009-09-22 ALA A:477 A:478 0.0 0.0 I -59.3 -49.7 0.0 0.0 0.0 HOH
 4.855
 N
 O
6ef4 1 Q76MZ3 99.66 0.0 X-RAY
 2019-06-26 ALA A:479 A:478 0.0 0.0 H -59.1 -43.6 0.0 0.0 0.0
6iur 1 P30153 100.0 0.0 X-RAY
 2019-12-04 ALA A:476 A:478 0.0 0.0 I -59.0 -42.5 0.0 0.0 0.0
ALA B:476 B:478 1.0 0.009 I -54.7 -48.5 1.0 0.009 0.0
ALA E:476 E:478 1.0 0.009 H -50.0 -56.9 NA NA NA
ALA F:476 F:478 2.0 0.017 I -60.6 -46.9 NA NA NA
2nyl 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 ALA A:471 A:478 0.0 0.0 H -52.7 -28.1 0.0 0.0 0.0
ALA D:471 D:478 0.0 0.0 H -48.2 -29.7 NA NA NA
2nym 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 ALA A:471 A:478 0.0 0.0 H -65.4 -49.8 0.0 0.0 0.0
ALA D:471 D:478 0.0 0.0 H -66.3 -58.9 NA NA NA
4i5l 1 P30153 99.66 0.0 X-RAY
 2013-05-08 ALA A:473 A:478 0.0 0.0 H -55.7 -50.1 0.0 0.0 0.0 PEG
HOH
 7.835
6.145
 O
O
 C4
O
ALA D:473 D:478 0.0 0.0 H -61.9 -45.2 NA NA NA
4i5n 1 P30153 99.66 0.0 X-RAY
 2013-05-08 ALA A:473 A:478 0.0 0.0 I -62.3 -49.4 0.0 0.0 0.0 HOH
 5.721
 O
 O
ALA D:473 D:478 0.0 0.0 H -51.7 -57.0 NA NA NA
3dw8 1 P30153 100.0 0.0 X-RAY
 2008-10-07 ALA A:471 A:478 0.0 0.0 H -68.3 -26.9 0.0 0.0 0.0
ALA D:471 D:478 0.0 0.0 H -75.2 -23.0 NA NA NA
5w0w 1 P30153 100.0 0.0 X-RAY
 2018-01-17 ALA A:474 A:478 0.0 0.0 I -70.0 -41.9 0.0 0.0 0.0
ALA D:474 D:478 0.0 0.0 H -67.4 -50.0 NA NA NA
ALA G:474 G:478 0.0 0.0 H -71.3 -37.8 NA NA NA
ALA J:474 J:478 1.0 0.009 H -82.6 -13.6 NA NA NA
2pkg 1 P30153 100.0 0.0 X-RAY
 2007-05-15 ALA A:469 A:478 0.0 0.0 I -50.8 -55.3 0.0 0.0 0.0
ALA B:469 B:478 0.0 0.0 I -62.2 -39.7 NA NA NA
3c5w 1 P30153 88.39 1e-141 X-RAY
 2008-04-15 ALA A:121 A:478 0.0 0.0 I -66.0 -43.3 0.0 0.0 0.0
4lac 2 ? 85.71 9e-137 X-RAY
 2013-10-09 ALA B:147 A:478 0.0 0.0 H -59.7 -45.1 0.0 0.0 0.0 HOH
 5.349
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p30153-f1 1 P30153 100.0 0.0 ALA A:478 A:478 0.0 0.0 H -55.2 -44.1
af-p30154-f1 1 P30154 86.4 0.0 ALA A:490 A:490 0.0 0.0 I -57.8 -46.0