Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 52725370 . G A CCDS12849.1:NM_014225.5:c.1537Ggg>Agg_NP_055040.2:p.513G>R Homo sapiens protein phosphatase 2 scaffold subunit Aalpha (PPP2R1A), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2ie3 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 GLY A:513 A:513 19.0 0.253 H 80.0 150.3 19.0 0.253 0.0
2ie4 1 Q96DH3 100.0 0.0 X-RAY
 2006-11-07 GLY A:513 A:513 21.0 0.28 H 84.1 160.1 21.0 0.28 0.0
2npp 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 GLY A:513 A:513 24.0 0.32 H 80.5 148.9 NA NA NA
GLY D:513 D:513 23.0 0.307 H 96.9 148.9 23.0 0.307 0.0
3k7v 1 P30153 100.0 0.0 X-RAY
 2009-11-03 GLY A:513 A:513 21.0 0.28 H 84.9 155.9 21.0 0.28 0.0
3k7w 1 P30153 100.0 0.0 X-RAY
 2009-11-03 GLY A:513 A:513 20.0 0.267 H 85.9 155.6 20.0 0.267 0.0
6nts 1 P30153 100.0 0.0 EM
 2020-05-06 GLY A:513 A:513 25.0 0.333 135.1 -166.5 25.0 0.333 0.0
7cun 10 P30153 100.0 0.0 EM
 2020-11-25 GLY J:513 P:513 23.0 0.307 T 69.8 -153.6 23.0 0.307 0.0
7k36 1 P30153 100.0 0.0 EM
 2021-03-10 GLY A:513 A:513 19.0 0.253 80.7 135.4 19.0 0.253 0.0
7pks 31 P30153 100.0 0.0 EM
 2021-12-08 GLY EA:513 p:513 31.0 0.413 78.6 -154.4 31.0 0.413 0.0
2iae 1 Q76MZ3 99.83 0.0 X-RAY
 2006-12-26 GLY A:513 A:513 34.0 0.453 H 69.6 -174.4 34.0 0.453 0.0
GLY D:513 D:513 14.0 0.187 H 17.6 -130.2 NA NA NA
2pf4 1 Q76MZ3 99.83 0.0 X-RAY
 2007-08-07 GLY A:513 A:513 23.0 0.307 H 72.2 179.7 23.0 0.307 0.0
GLY B:513 B:513 24.0 0.32 T 64.0 -151.3 NA NA NA
GLY C:513 C:513 16.0 0.213 133.7 178.0 NA NA NA
GLY D:513 D:513 30.0 0.4 163.2 -123.6 NA NA NA
1b3u 1 P30153 100.0 0.0 X-RAY
 1999-04-12 GLY A:512 A:512 25.0 0.333 H 91.9 164.2 25.0 0.333 0.0 HOH
 3.482
 C
 O
GLY B:512 B:512 28.0 0.373 93.7 170.3 NA NA NA
3fga 1 Q76MZ3 99.83 0.0 X-RAY
 2009-09-22 GLY A:512 A:513 32.0 0.427 H 85.1 163.5 32.0 0.427 0.0 HOH
 8.000
 O
 O
6ef4 1 Q76MZ3 99.66 0.0 X-RAY
 2019-06-26 GLY A:514 A:513 22.0 0.293 T 92.6 -142.7 22.0 0.293 0.0
6iur 1 P30153 100.0 0.0 X-RAY
 2019-12-04 GLY A:511 A:513 29.0 0.387 H 74.3 178.0 29.0 0.387 0.0
GLY B:511 B:513 20.0 0.267 -47.3 164.9 20.0 0.267 0.0
GLY E:511 E:513 27.0 0.36 T 60.4 170.0 NA NA NA
GLY F:511 F:513 35.0 0.467 H 74.6 -178.6 NA NA NA
2nyl 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 GLY A:506 A:513 38.0 0.507 62.2 143.7 38.0 0.507 0.0
GLY D:506 D:513 37.0 0.493 T 55.7 153.1 NA NA NA
2nym 1 Q96DH3 100.0 0.0 X-RAY
 2006-12-12 GLY A:506 A:513 39.0 0.52 T 54.0 160.6 39.0 0.52 0.0
GLY D:506 D:513 36.0 0.48 T 51.2 159.7 NA NA NA
4i5l 1 P30153 99.66 0.0 X-RAY
 2013-05-08 GLY A:508 A:513 28.0 0.373 H 85.1 168.3 28.0 0.373 0.0 HOH
 3.119
 N
 O
GLY D:508 D:513 32.0 0.427 H 80.1 165.9 NA NA NA
4i5n 1 P30153 99.66 0.0 X-RAY
 2013-05-08 GLY A:508 A:513 28.0 0.373 H 83.6 157.3 28.0 0.373 0.0 HOH
 3.160
 O
 O
GLY D:508 D:513 31.0 0.413 88.9 155.2 NA NA NA
3dw8 1 P30153 100.0 0.0 X-RAY
 2008-10-07 GLY A:506 A:513 19.0 0.253 H 69.6 132.6 19.0 0.253 0.0
GLY D:506 D:513 22.0 0.293 H 70.2 133.5 NA NA NA
5w0w 1 P30153 100.0 0.0 X-RAY
 2018-01-17 GLY A:509 A:513 30.0 0.4 T 61.7 -159.8 30.0 0.4 0.0
GLY D:509 D:513 19.0 0.253 H 87.8 149.7 NA NA NA
GLY G:509 G:513 24.0 0.32 55.2 -164.9 NA NA NA
GLY J:509 J:513 12.0 0.16 144.2 151.4 NA NA NA
2pkg 1 P30153 100.0 0.0 X-RAY
 2007-05-15 GLY A:504 A:513 34.0 0.453 71.0 157.1 34.0 0.453 0.0
GLY B:504 B:513 28.0 0.373 79.2 139.1 NA NA NA
3c5w 1 P30153 88.39 1e-141 X-RAY
 2008-04-15 GLY A:156 A:513 33.0 0.44 H 85.6 -179.5 33.0 0.44 0.0 HOH
 3.211
 C
 O
4lac 2 ? 85.71 9e-137 X-RAY
 2013-10-09 GLY B:182 A:513 18.0 0.24 H 78.4 166.0 18.0 0.24 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p30153-f1 1 P30153 100.0 0.0 GLY A:513 A:513 29.0 0.387 H 74.8 174.3
af-p30154-f1 1 P30154 86.4 0.0 GLY A:525 A:525 27.0 0.36 82.8 167.1