Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783256 . A C CCDS12886.1:NM_005874.3:c.602tTg>tGg_NP_005865.2:p.201L>W Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 LEU A:178 A:179 69.0 0.406 T -71.0 -37.1 69.0 0.406 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 SER B:210 B:179 63.0 0.548 T -67.6 -12.6 63.0 0.548 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 SER G:178 G:179 69.0 0.6 T -62.8 -20.9 69.0 0.6 0.0
SER H:178 H:179 71.0 0.617 T -68.9 -4.9 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 LEU A:179 A:179 86.0 0.506 T -58.6 -32.8 86.0 0.506 0.0 BEN
BEN
HOH
 7.663
7.440
3.029
 N
CD1
N
 N2
C5
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 LEU A:178 A:179 60.0 0.353 T -62.8 -29.5 60.0 0.353 0.0 HOH
 2.724
 O
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 LEU D:178 D:178 114.0 0.671 T -53.8 -27.5 114.0 0.671 0.0 HOH
 5.408
 N
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 SER A:179 A:179 75.0 0.652 T -55.5 -17.2 75.0 0.652 0.0 HOH
 3.797
 OG
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 SER C:179 D:179 57.0 0.496 T -60.4 -13.3 57.0 0.496 0.0 HOH
 4.778
 N
 O
SER F:179 H:179 66.0 0.574 T -59.2 -14.3 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 SER D:180 D:179 52.0 0.452 T -58.0 -38.3 52.0 0.452 0.0
SER H:180 H:179 56.0 0.487 T -76.8 -12.4 NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 SER A:178 A:179 59.0 0.513 T -51.8 -18.0 59.0 0.513 0.0 HOH
 2.823
 O
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 SER D:178 D:179 63.0 0.548 T -38.0 -27.4 63.0 0.548 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 SER A:178 A:179 71.0 0.617 T -63.3 -12.9 71.0 0.617 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 SER D:176 D:179 58.0 0.504 T -65.6 -17.4 58.0 0.504 0.0 HOH
 4.828
 CB
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:176 D:179 58.0 0.504 T -69.0 -18.5 58.0 0.504 0.0 HOH
 4.864
 CB
 O
SER H:176 H:179 54.0 0.47 T -58.6 -24.7 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 SER D:176 D:179 51.0 0.443 T -63.6 -23.6 51.0 0.443 0.0
SER H:176 H:179 50.0 0.435 T -63.7 -23.3 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:176 D:179 56.0 0.487 T -66.9 -24.7 56.0 0.487 0.0 HOH
 5.357
 N
 O
SER H:176 H:179 59.0 0.513 T -66.5 -19.3 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 SER A:179 A:179 67.0 0.583 T -63.7 -19.1 38.0 0.33 0.253 B:Q8NHL6:0.252
 HOH
 6.302
 O
 O
SER B:179 B:179 68.0 0.591 T -63.3 -19.2 39.0 0.339 0.252 A:Q8NHL6:0.252
 HOH
 4.191
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 LEU A:201 A:201 95.0 0.559 T -59.4 -29.1
af-o75019-f1 1 O75019 84.62 0.0 SER A:202 A:202 74.0 0.643 T -59.7 -24.3
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 SER A:202 A:202 61.0 0.53 T -60.8 -21.4