Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783292 . T A CCDS12886.1:NM_005874.3:c.566aAt>aTt_NP_005865.2:p.189N>I Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 ASN A:166 A:167 85.0 NA T -83.0 -19.0 85.0 NA NA
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 SER B:198 B:167 100.0 0.87 T -75.9 -0.6 100.0 0.87 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 SER G:166 NA:NA DO NA DO DO DO NA NA NA
SER H:166 NA:NA DO NA DO DO DO NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 ASN A:167 A:167 146.0 0.912 S -56.1 -52.5 146.0 0.912 0.0
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 ASN A:166 A:167 104.0 NA T -86.7 -2.9 104.0 NA NA HOH
 4.109
 N
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 ASN D:166 D:166 98.0 NA S -84.6 48.4 98.0 NA NA HOH
 8.856
 C
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 SER A:167 A:167 108.0 0.939 T -72.8 -5.4 108.0 0.939 0.0 HOH
 3.122
 OG
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 SER C:167 D:167 137.0 1.0 T 76.7 -8.9 137.0 1.0 0.0 HOH
 9.978
 N
 O
SER F:167 H:167 112.0 0.974 T -79.8 -19.6 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 SER D:168 NA:NA DO NA DO DO DO NA NA NA
SER H:168 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 SER A:166 A:167 116.0 1.0 T -69.9 -12.9 116.0 1.0 0.0 HOH
 2.603
 O
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 SER D:166 D:167 114.0 0.991 T -58.7 1.8 114.0 0.991 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 SER A:166 NA:NA DO NA DO DO DO NA NA NA
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 SER D:164 D:167 102.0 0.887 T -74.4 -30.0 102.0 0.887 0.0 HOH
 7.614
 OG
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:164 D:167 120.0 1.0 S -66.1 -33.1 120.0 1.0 0.0 HOH
 7.691
 OG
 O
SER H:164 H:167 105.0 0.913 T -57.7 -52.7 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 SER D:164 D:167 107.0 0.93 S -79.9 -70.5 107.0 0.93 0.0
SER H:164 H:167 103.0 0.896 S -81.6 -68.9 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:164 D:167 107.0 0.93 T -57.2 -29.8 107.0 0.93 0.0 HOH
 9.526
 N
 O
SER H:164 H:167 107.0 0.93 T -65.2 -20.1 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 SER A:167 A:167 100.0 0.87 T -57.1 -10.5 100.0 0.87 0.0 HOH
 9.498
 OG
 O
SER B:167 B:167 133.0 1.0 -39.7 360.0 133.0 1.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 ASN A:189 A:189 111.0 0.694 T -76.7 -0.2
af-o75019-f1 1 O75019 84.62 0.0 SER A:190 A:190 93.0 0.809 T -73.5 -9.6
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 SER A:190 A:190 85.0 0.739 T -70.8 -9.5