Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54783461 | . | C | A | CCDS12886.1:NM_005874.3:c.397Gtg>Ttg_NP_005865.2:p.133V>L | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aed | 1 | Q8N423 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | VAL | A:110 | A:111 | 14.0 | 0.09 | S | -135.0 | 119.0 | 14.0 | 0.09 | 0.0 | ||||||
6zdx | 2 | A0A0G2JQ46 | 80.15 | 0.0 |
X-RAY |
2020-07-22 | VAL | B:142 | B:111 | 27.0 | 0.174 | E | -91.4 | 111.5 | 27.0 | 0.174 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 80.61 | 0.0 |
X-RAY |
2019-07-31 | VAL | G:110 | G:111 | 35.0 | 0.226 | -118.9 | 101.2 | 35.0 | 0.226 | 0.0 | |||||||
VAL | H:110 | H:111 | 28.0 | 0.181 | -113.0 | 97.0 | NA | NA | NA | ||||||||||||||
6bcs | 1 | A0A0G2JNQ7 | 99.49 | 3e-141 |
X-RAY |
2018-09-05 | VAL | A:111 | A:111 | 74.0 | 0.477 | B | -99.5 | 121.5 | 74.0 | 0.477 | 0.0 |
HOH |
4.092 |
O |
O |
||
2gw5 | 1 | Q8N423 | 99.49 | 5e-141 |
X-RAY |
2006-06-20 | VAL | A:110 | A:111 | 75.0 | 0.484 | B | -95.1 | 116.1 | 75.0 | 0.484 | 0.0 |
HOH |
3.347 |
O |
O |
||
2dyp | 4 | Q8N423 | 98.98 | 3e-139 |
X-RAY |
2006-11-07 | VAL | D:110 | D:110 | 72.0 | 0.465 | B | -102.6 | 124.8 | 72.0 | 0.465 | 0.0 |
HOH |
9.535 |
CA |
O |
||
1ugn | 1 | Q8NHL6 | 81.31 | 7e-105 |
X-RAY |
2004-08-10 | VAL | A:111 | A:111 | 87.0 | 0.561 | E | -107.9 | 110.7 | 87.0 | 0.561 | 0.0 |
HOH |
2.596 |
O |
O |
||
3d2u | 3 | Q8NHL6 | 80.81 | 3e-104 |
X-RAY |
2008-07-08 | VAL | C:111 | D:111 | 61.0 | 0.394 | E | -99.1 | 124.0 | 61.0 | 0.394 | 0.0 |
HOH |
6.759 |
N |
O |
||
VAL | F:111 | H:111 | 68.0 | 0.439 | E | -93.0 | 116.3 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 6e-104 |
X-RAY |
2019-11-27 | VAL | D:112 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
VAL | H:112 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2001-01-17 | VAL | A:110 | A:111 | 68.0 | 0.439 | E | -88.3 | 112.2 | 68.0 | 0.439 | 0.0 |
HOH |
3.380 |
O |
O |
||
1p7q | 4 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2003-10-14 | VAL | D:110 | D:111 | 52.0 | 0.335 | E | -105.4 | 110.7 | 52.0 | 0.335 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2004-08-10 | VAL | A:110 | A:111 | 96.0 | 0.619 | -92.9 | 109.3 | 96.0 | 0.619 | 0.0 | |||||||
4no0 | 4 | Q8NHL6 | 81.54 | 2e-103 |
X-RAY |
2014-11-19 | VAL | D:108 | D:111 | 68.0 | 0.439 | E | -101.7 | 124.3 | 68.0 | 0.439 | 0.0 |
HOH |
3.838 |
O |
O |
||
6ewa | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | VAL | D:108 | D:111 | 71.0 | 0.458 | E | -94.5 | 127.8 | 71.0 | 0.458 | 0.0 | ||||||
VAL | H:108 | H:111 | 69.0 | 0.445 | E | -90.7 | 119.7 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | VAL | D:108 | D:111 | 75.0 | 0.484 | E | -86.8 | 132.4 | 75.0 | 0.484 | 0.0 | ||||||
VAL | H:108 | H:111 | 74.0 | 0.477 | E | -87.1 | 134.3 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | VAL | D:108 | D:111 | 65.0 | 0.419 | E | -90.8 | 113.0 | 65.0 | 0.419 | 0.0 |
HOH |
3.260 |
O |
O |
||
VAL | H:108 | H:111 | 66.0 | 0.426 | E | -94.8 | 120.5 | NA | NA | NA | |||||||||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | VAL | A:111 | A:111 | 64.0 | 0.413 | E | -84.7 | 115.7 | 64.0 | 0.413 | 0.0 |
HOH |
3.797 |
O |
O |
||
VAL | B:111 | B:111 | 60.0 | 0.387 | E | -108.2 | 108.0 | 60.0 | 0.387 | 0.0 |
HOH |
7.690 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n423-f1 | 1 | Q8N423 | 100.0 | 0.0 | VAL | A:133 | A:133 | 25.0 | 0.161 | B | -88.1 | 121.1 | |
af-o75019-f1 | 1 | O75019 | 84.62 | 0.0 | VAL | A:134 | A:134 | 21.0 | 0.135 | E | -89.4 | 120.6 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.12 | 0.0 | VAL | A:134 | A:134 | 36.0 | 0.232 | B | -88.9 | 120.5 |