Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783892 . A C CCDS12886.1:NM_005874.3:c.109Tct>Gct_NP_005865.2:p.37S>A Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 SER A:14 A:14 36.0 0.313 S -81.2 -1.2 36.0 0.313 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 SER B:45 B:14 48.0 0.417 S -85.2 -33.8 48.0 0.417 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 SER G:13 G:14 42.0 0.365 S -89.1 -15.0 42.0 0.365 0.0
SER H:13 H:14 42.0 0.365 S -87.0 -11.1 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 SER A:15 A:14 36.0 0.313 S -98.2 3.0 36.0 0.313 0.0 BEN
BEN
HOH
 9.750
3.352
2.418
 O
OG
OG
 C3
N1
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 SER A:14 A:14 34.0 0.296 S -101.7 1.0 34.0 0.296 0.0 HOH
 4.682
 CB
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 SER D:14 D:14 30.0 0.261 S -87.7 -14.8 30.0 0.261 0.0 HOH
 4.818
 OG
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 SER A:14 A:14 48.0 0.417 S -91.7 -5.5 48.0 0.417 0.0 HOH
 2.829
 OG
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 SER C:14 D:14 52.0 0.452 S -92.6 -7.6 52.0 0.452 0.0 HOH
 2.764
 OG
 O
SER F:14 H:14 50.0 0.435 S -100.3 -3.2 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 SER D:15 D:14 51.0 0.443 S -94.7 -12.1 51.0 0.443 0.0
SER H:15 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 SER A:13 A:14 39.0 0.339 S -97.7 -0.9 39.0 0.339 0.0 HOH
 2.988
 OG
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 SER D:13 D:14 42.0 0.365 S -67.1 -160.2 42.0 0.365 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 SER A:13 A:14 44.0 0.383 S -89.8 1.1 44.0 0.383 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 SER D:11 D:14 46.0 0.4 S -95.2 2.6 46.0 0.4 0.0 HOH
 6.983
 C
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:11 D:14 45.0 0.391 S -95.1 0.4 45.0 0.391 0.0
SER H:11 H:14 48.0 0.417 S -101.6 4.4 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 SER D:11 D:14 54.0 0.47 S -97.8 -2.1 54.0 0.47 0.0
SER H:11 H:14 53.0 0.461 S -98.1 -2.1 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 SER D:11 D:14 44.0 0.383 S -99.9 -2.8 44.0 0.383 0.0 HOH
 3.032
 OG
 O
SER H:11 H:14 46.0 0.4 S -96.7 -0.7 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 SER A:14 A:14 49.0 0.426 S -88.2 -18.2 49.0 0.426 0.0 HOH
 2.727
 OG
 O
SER B:14 B:14 50.0 0.435 S -90.9 -0.5 50.0 0.435 0.0 HOH
 3.420
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 SER A:37 A:37 26.0 0.226 S -81.7 -17.2
af-o75019-f1 1 O75019 84.62 0.0 SER A:37 A:37 29.0 0.252 S -91.1 -16.7
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 SER A:37 A:37 28.0 0.243 S -91.0 -17.5