Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803081 . C A CCDS12887.1:NM_006865.3:c.596gGt>gTt_NP_006856.3:p.199G>V Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
 2020-07-22 ALA B:207 B:176 0.0 0.0 E -120.0 145.0 0.0 0.0 0.0
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
 2019-07-31 ALA G:175 G:176 0.0 0.0 E -127.0 143.0 0.0 0.0 0.0
ALA H:175 H:176 0.0 0.0 E -125.0 143.0 NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
 2019-07-31 GLY A:175 A:176 0.0 0.0 E -137.0 146.9 0.0 0.0 0.0
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
 2008-07-08 ALA C:176 D:176 0.0 0.0 E -119.3 147.0 0.0 0.0 0.0 HOH
 6.510
 CB
 O
ALA F:176 H:176 0.0 0.0 E -116.1 155.9 NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
 2019-11-27 ALA D:177 D:176 1.0 0.009 E -134.4 156.7 1.0 0.009 0.0
ALA H:177 H:176 0.0 0.0 -114.4 132.6 NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
 2001-01-17 ALA A:175 A:176 0.0 0.0 E -114.5 152.5 0.0 0.0 0.0 HOH
 4.431
 CB
 O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
 2003-10-14 ALA D:175 D:176 1.0 0.009 E -117.8 137.1 1.0 0.009 0.0
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
 2004-08-10 ALA A:175 A:176 0.0 0.0 E -116.6 154.3 0.0 0.0 0.0
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
 2004-08-10 ALA A:176 A:176 0.0 0.0 E -117.2 147.4 0.0 0.0 0.0 HOH
 3.766
 CB
 O
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
 2014-11-19 ALA D:173 D:176 1.0 0.009 E -116.5 153.5 1.0 0.009 0.0 HOH
 5.639
 O
 O
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ALA D:173 D:176 1.0 0.009 E -121.7 146.8 1.0 0.009 0.0 HOH
 5.555
 O
 O
ALA H:173 H:176 0.0 0.0 E -106.7 150.9 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
 2018-11-07 ALA D:173 D:176 0.0 0.0 E -112.6 152.6 0.0 0.0 0.0
ALA H:173 H:176 0.0 0.0 E -112.5 152.1 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ALA D:173 D:176 0.0 0.0 E -119.4 151.5 0.0 0.0 0.0 HOH
 4.122
 CB
 O
ALA H:173 H:176 0.0 0.0 E -110.2 152.9 NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
 2005-08-02 ALA A:176 A:176 0.0 0.0 E -113.5 145.6 0.0 0.0 0.0
ALA B:176 B:176 0.0 0.0 E -125.9 147.3 0.0 0.0 0.0 HOH
 7.790
 O
 O
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
 2017-06-14 ALA C:245 D:176 1.0 0.009 E -141.6 143.5 1.0 0.009 0.0
2otp 1 Q8N149 83.84 4e-112 X-RAY
 2008-02-19 ALA A:174 A:174 58.0 0.504 -149.9 139.9 0.0 0.0 0.504 B:Q8N149:0.504
 HOH
 4.912
 CB
 O
ALA B:174 B:174 64.0 0.557 -146.3 134.5 0.0 0.0 0.557 A:Q8N149:0.557
2gw5 1 Q8N423 80.3 5e-106 X-RAY
 2006-06-20 GLY A:175 A:176 0.0 0.0 E -106.3 154.8 0.0 0.0 0.0 HOH
 5.498
 O
 O
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
 2018-09-05 GLY A:176 A:176 0.0 0.0 E -103.1 151.6 0.0 0.0 0.0 BEN
BEN
DMS
HOH
 6.698
7.847
9.890
5.497
 C
C
O
O
 N2
C5
C1
O
2dyp 4 Q8N423 80.2 2e-105 X-RAY
 2006-11-07 GLY D:175 D:175 0.0 0.0 E -124.7 152.2 0.0 0.0 0.0 HOH
 5.340
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 GLY A:199 A:199 0.0 0.0 E -113.2 149.3
af-o75019-f1 1 O75019 85.39 0.0 ALA A:199 A:199 0.0 0.0 E -123.5 146.5
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 ALA A:199 A:199 0.0 0.0 E -120.8 147.3
af-q8n149-f1 1 Q8N149 81.84 0.0 ALA A:197 A:197 0.0 0.0 E -121.2 150.4
af-q8n423-f1 1 Q8N423 81.12 0.0 GLY A:198 A:198 0.0 0.0 E -110.2 149.4