Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54803309 . C A CCDS12887.1:NM_006865.3:c.368aGc>aTc_NP_006856.3:p.123S>I Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LILRA3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zdx 2 A0A0G2JQ46 85.71 0.0 X-RAY
 2020-07-22 ILE B:131 B:100 101.0 0.577 -55.1 128.5 42.0 0.24 0.337 A:Q8I4N9:0.337
6aee 4 A0A0G2JQ44 86.22 0.0 X-RAY
 2019-07-31 ILE G:99 G:100 65.0 0.371 -73.0 165.2 38.0 0.217 0.154 B:P61769:0.154
ILE H:99 H:100 70.0 0.4 -68.7 163.2 NA NA NA
6aed 1 Q8N423 81.36 0.0 X-RAY
 2019-07-31 PRO A:99 A:100 111.0 0.766 -61.0 147.0 111.0 0.766 0.0
3d2u 3 Q8NHL6 88.38 3e-121 X-RAY
 2008-07-08 ILE C:100 D:100 88.0 0.503 -54.2 143.4 34.0 0.194 0.309 B:P61769:0.309
 HOH
 3.977
 O
 O
ILE F:100 H:100 112.0 0.64 -62.8 146.5 NA NA NA
6k60 4 A0A0G2JQ44 88.78 5e-121 X-RAY
 2019-11-27 ILE D:101 D:100 90.0 0.514 -68.8 150.5 36.0 0.206 0.308 B:P61769:0.309
ILE H:101 H:100 105.0 0.6 -73.0 159.2 NA NA NA
1g0x 1 Q8NHL6 88.78 9e-121 X-RAY
 2001-01-17 ILE A:99 A:100 86.0 0.491 -56.0 139.7 86.0 0.491 0.0 HOH
 2.815
 O
 O
1p7q 4 Q8NHL6 88.78 9e-121 X-RAY
 2003-10-14 ILE D:99 D:100 99.0 0.566 -58.0 150.2 42.0 0.24 0.326 B:P61769:0.326
1ufu 1 Q8NHL6 88.78 9e-121 X-RAY
 2004-08-10 ILE A:99 A:100 50.0 0.286 -126.1 137.8 50.0 0.286 0.0
1ugn 1 Q8NHL6 87.88 2e-120 X-RAY
 2004-08-10 ILE A:100 A:100 73.0 0.417 -56.2 149.8 73.0 0.417 0.0 HOH
 2.856
 O
 O
4no0 4 Q8NHL6 88.72 2e-120 X-RAY
 2014-11-19 ILE D:97 D:100 91.0 0.52 -68.0 148.1 37.0 0.211 0.309 B:P61769:0.309
 HOH
 6.425
 CG2
 O
6ewa 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ILE D:97 D:100 89.0 0.509 -60.0 151.8 34.0 0.194 0.315 B:P61769:0.314
 HOH
 4.063
 O
 O
ILE H:97 H:100 89.0 0.509 -64.4 151.3 NA NA NA
6ewc 4 A0A0G2JQ44 88.72 2e-120 X-RAY
 2018-11-07 ILE D:97 D:100 88.0 0.503 -59.1 148.9 36.0 0.206 0.297 B:P61769:0.297
ILE H:97 H:100 88.0 0.503 -58.6 147.9 NA NA NA
6ewo 4 D9IDM8 88.72 2e-120 X-RAY
 2018-11-07 ILE D:97 D:100 89.0 0.509 -60.4 151.6 38.0 0.217 0.292 B:P61769:0.291
 HOH
 2.918
 O
 O
ILE H:97 H:100 90.0 0.514 -58.3 151.2 NA NA NA
1vdg 1 Q8NHL6 88.27 3e-120 X-RAY
 2005-08-02 ILE A:100 A:100 77.0 0.44 -51.1 161.9 77.0 0.44 0.0 HOH
 3.763
 CA
 O
ILE B:100 B:100 70.0 0.4 -69.7 141.3 70.0 0.4 0.0 HOH
 2.673
 N
 O
5knm 3 Q8NHL6 87.88 3e-120 X-RAY
 2017-06-14 ILE C:169 D:100 66.0 0.377 -76.7 155.2 34.0 0.194 0.183 B:P61769:0.183
2otp 1 Q8N149 83.84 4e-112 X-RAY
 2008-02-19 SER A:98 A:98 64.0 0.557 -63.7 119.2 57.0 0.496 0.061 B:Q8N149:0.061
SER B:98 B:98 52.0 0.452 -53.8 126.2 47.0 0.409 0.043 A:Q8N149:0.043
 HOH
 2.955
 O
 O
2gw5 1 Q8N423 80.3 5e-106 X-RAY
 2006-06-20 PRO A:99 A:100 103.0 0.71 -55.7 144.4 103.0 0.71 0.0 HOH
 2.713
 O
 O
6bcs 1 A0A0G2JNQ7 80.3 6e-106 X-RAY
 2018-09-05 PRO A:100 A:100 112.0 0.772 -59.4 148.9 112.0 0.772 0.0 BEN
DMS
HOH
 3.477
8.513
2.850
 CD
CD
O
 C4
C1
O
2dyp 4 Q8N423 80.2 2e-105 X-RAY
 2006-11-07 PRO D:99 D:99 97.0 0.669 -54.2 144.3 55.0 0.379 0.29 B:P61769:0.29
 HOH
 3.532
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n6c8-f1 1 Q8N6C8 100.0 0.0 SER A:123 A:123 61.0 0.53 -59.2 144.9
af-o75019-f1 1 O75019 85.39 0.0 ILE A:123 A:123 103.0 0.589 -59.4 144.9
af-q8nhl6-f1 1 Q8NHL6 86.4 0.0 ILE A:123 A:123 95.0 0.543 -58.8 148.1
af-q8n149-f1 1 Q8N149 81.84 0.0 SER A:121 A:121 69.0 0.6 -63.2 147.1
af-q8n423-f1 1 Q8N423 81.12 0.0 PRO A:122 A:122 86.0 0.593 -56.3 148.0