Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086200 . G A CCDS12900.1:NM_006866.2:c.355Gcc>Acc_NP_006857.1:p.119A>T Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 ALA G:97 G:98 36.0 0.313 S -81.1 -35.1 5.0 0.043 0.27 B:P61769:0.27
ALA H:97 H:98 36.0 0.313 S -93.0 -34.9 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 ALA A:96 A:96 57.0 0.496 -94.8 -52.9 40.0 0.348 0.148 B:Q8N149:0.148
ALA B:96 B:96 58.0 0.504 -73.4 -59.3 44.0 0.383 0.121 A:Q8N149:0.122
 HOH
 7.394
 CB
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 ALA C:98 D:98 37.0 0.322 S -65.3 -41.4 1.0 0.009 0.313 B:P61769:0.313
 HOH
 2.760
 O
 O
ALA F:98 H:98 34.0 0.296 S -73.7 -28.3 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 ALA D:99 D:98 36.0 0.313 S -81.8 -42.6 5.0 0.043 0.27 B:P61769:0.27
ALA H:99 H:98 33.0 0.287 E -104.2 -41.0 NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 ALA A:98 A:98 36.0 0.313 S -79.5 -22.3 36.0 0.313 0.0 HOH
 4.629
 N
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 ALA A:97 A:98 34.0 0.296 S -76.3 -23.8 34.0 0.296 0.0 HOH
 2.805
 O
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 ALA D:97 D:98 36.0 0.313 E -94.1 -56.8 2.0 0.017 0.296 B:P61769:0.296
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 ALA A:97 A:98 33.0 0.287 S -84.8 -16.0 33.0 0.287 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ALA A:98 A:98 37.0 0.322 S -82.6 -32.1 37.0 0.322 0.0 HOH
 5.129
 CB
 O
ALA B:98 B:98 39.0 0.339 S -86.4 -26.2 39.0 0.339 0.0 HOH
 4.347
 O
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 ALA D:95 D:98 35.0 0.304 S -59.7 -37.4 15.0 0.13 0.174 B:P61769:0.174
 HOH
 6.575
 CB
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ALA D:95 D:98 35.0 0.304 S -66.5 -43.0 10.0 0.087 0.217 B:P61769:0.217
 HOH
 6.575
 CB
 O
ALA H:95 H:98 52.0 0.452 S -62.2 -49.1 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 ALA D:95 D:98 43.0 0.374 S -82.0 -33.2 13.0 0.113 0.261 B:P61769:0.261
ALA H:95 H:98 41.0 0.357 S -82.7 -31.9 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ALA D:95 D:98 33.0 0.287 S -75.8 -32.4 7.0 0.061 0.226 B:P61769:0.226
 HOH
 4.726
 N
 O
ALA H:95 H:98 41.0 0.357 S -63.9 -54.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 ALA A:119 A:119 39.0 0.339 E -75.3 -23.1
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 ALA A:121 A:121 40.0 0.348 S -77.0 -22.5
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 ALA A:121 A:121 45.0 0.391 S -75.7 -30.3