Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086255 . G A CCDS12900.1:NM_006866.2:c.410gGg>gAg_NP_006857.1:p.137G>E Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 GLY G:115 G:116 39.0 0.52 -107.2 -171.0 39.0 0.52 0.0
GLY H:115 H:116 49.0 0.653 S -117.1 -179.1 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 GLY A:114 A:114 33.0 0.44 -89.1 -173.3 10.0 0.133 0.307 B:Q8N149:0.307
 HOH
 4.665
 CA
 O
GLY B:114 B:114 25.0 0.333 -101.9 151.1 4.0 0.053 0.28 A:Q8N149:0.28
 HOH
 3.235
 CA
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 GLY C:116 D:116 21.0 0.28 -76.0 147.5 21.0 0.28 0.0
GLY F:116 H:116 18.0 0.24 -84.7 166.2 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 GLY D:117 NA:NA DO NA DO DO DO NA NA NA
GLY H:117 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 GLY A:116 A:116 25.0 0.333 -84.0 161.8 25.0 0.333 0.0 HOH
 3.635
 N
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 GLY A:115 A:116 26.0 0.347 -91.3 171.4 26.0 0.347 0.0 HOH
 5.001
 CA
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 GLY D:115 D:116 21.0 0.28 -179.9 141.7 21.0 0.28 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 GLY A:115 A:116 26.0 0.347 -98.6 -170.0 26.0 0.347 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 GLY A:116 A:116 25.0 0.333 -90.9 -177.1 25.0 0.333 0.0 HOH
 5.222
 CA
 O
GLY B:116 B:116 21.0 0.28 -81.9 168.8 21.0 0.28 0.0 HOH
 3.483
 CA
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 GLY D:113 D:116 27.0 0.36 -97.9 172.4 27.0 0.36 0.0 HOH
 5.557
 N
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 GLY D:113 D:116 23.0 0.307 -86.8 161.1 23.0 0.307 0.0 HOH
 5.955
 N
 O
GLY H:113 H:116 21.0 0.28 -79.5 167.7 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 GLY D:113 D:116 28.0 0.373 -75.6 171.7 28.0 0.373 0.0
GLY H:113 H:116 27.0 0.36 -78.2 174.2 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 GLY D:113 D:116 23.0 0.307 -79.3 163.9 23.0 0.307 0.0 HOH
 6.965
 C
 O
GLY H:113 H:116 19.0 0.253 -81.1 164.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 GLY A:137 A:137 17.0 0.227 -74.7 160.8
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 GLY A:139 A:139 17.0 0.227 -77.3 163.5
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 GLY A:139 A:139 22.0 0.293 -79.0 167.6