Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086375 . G A CCDS12900.1:NM_006866.2:c.530tGg>tAg_NP_006857.1:p.177W>* Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 ARG G:155 G:156 154.0 0.684 E -153.0 139.0 154.0 0.684 0.0
ARG H:155 H:156 148.0 0.658 E -146.9 141.0 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 TRP A:154 A:154 148.0 0.58 168.9 133.2 60.0 0.235 0.345 B:Q8N149:0.345
 HOH
 6.001
 CZ2
 O
TRP B:154 B:154 130.0 0.51 -145.7 156.8 55.0 0.216 0.294 A:Q8N149:0.294
 HOH
 5.961
 N
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 ARG C:156 D:156 41.0 NA E -163.2 159.1 41.0 NA NA HOH
 6.255
 CB
 O
ARG F:156 H:156 80.0 NA 360.0 153.7 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 ARG D:157 D:156 126.0 0.56 -163.4 166.1 126.0 0.56 0.0
ARG H:157 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 ARG A:156 A:156 131.0 0.582 E -162.5 145.9 131.0 0.582 0.0 HOH
 4.866
 O
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 ARG A:155 A:156 110.0 0.489 E -164.3 150.3 110.0 0.489 0.0 HOH
 3.028
 NH1
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 ARG D:155 D:156 100.0 0.444 E -128.2 113.3 100.0 0.444 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 ARG A:155 A:156 140.0 0.622 E -150.8 153.5 140.0 0.622 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 ARG A:156 A:156 51.0 0.227 E -150.8 138.5 51.0 0.227 0.0 HOH
 3.694
 O
 O
ARG B:156 B:156 104.0 0.462 E -147.2 156.1 104.0 0.462 0.0 HOH
 7.409
 NH2
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 ARG D:153 D:156 89.0 0.396 E -140.2 126.3 89.0 0.396 0.0 HOH
 2.320
 NH1
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ARG D:153 D:156 87.0 0.387 E -152.5 125.1 87.0 0.387 0.0 HOH
 9.345
 N
 O
ARG H:153 H:156 99.0 0.44 E -151.6 151.0 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 ARG D:153 D:156 100.0 0.444 E -155.4 134.0 100.0 0.444 0.0
ARG H:153 H:156 98.0 0.436 E -156.8 133.2 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 ARG D:153 D:156 92.0 0.409 E -141.6 128.0 92.0 0.409 0.0 HOH
 2.719
 NH1
 O
ARG H:153 H:156 91.0 0.404 E -145.3 149.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 TRP A:177 A:177 51.0 0.2 E -149.3 161.0
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 ARG A:179 A:179 124.0 0.551 E -152.3 143.4
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 ARG A:179 A:179 120.0 0.533 E -147.3 144.7