Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086398 . G A CCDS12900.1:NM_006866.2:c.553Gtg>Atg_NP_006857.1:p.185V>M Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 VAL G:163 NA:NA DO NA DO DO DO NA NA NA
VAL H:163 NA:NA DO NA DO DO DO NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 VAL A:162 A:162 47.0 0.303 -80.9 153.0 1.0 0.006 0.297 B:Q8N149:0.297
 HOH
 4.721
 C
 O
VAL B:162 B:162 87.0 0.561 -85.9 126.6 12.0 0.077 0.484 A:Q8N149:0.484
 HOH
 3.985
 O
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 VAL C:164 D:164 2.0 0.013 -94.5 159.1 2.0 0.013 0.0 HOH
 9.268
 O
 O
VAL F:164 H:164 2.0 0.013 -83.2 160.3 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 VAL D:165 NA:NA DO NA DO DO DO NA NA NA
VAL H:165 NA:NA DO NA DO DO DO NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 VAL A:164 A:164 1.0 0.006 -84.2 156.5 1.0 0.006 0.0 HOH
 3.695
 O
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 VAL A:163 A:164 2.0 0.013 -103.2 155.9 2.0 0.013 0.0 HOH
 4.661
 N
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 VAL D:163 D:164 4.0 0.026 -69.4 -174.6 4.0 0.026 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 VAL A:163 A:164 52.0 0.335 360.0 360.0 52.0 0.335 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 VAL A:164 A:164 1.0 0.006 -88.2 157.6 1.0 0.006 0.0 HOH
 5.848
 N
 O
VAL B:164 B:164 0.0 0.0 -79.5 129.0 0.0 0.0 0.0 HOH
 7.240
 CG2
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 VAL D:161 D:164 0.0 0.0 -98.9 157.5 0.0 0.0 0.0 HOH
 4.268
 O
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 VAL D:161 D:164 0.0 0.0 -93.3 169.5 0.0 0.0 0.0 HOH
 3.329
 O
 O
VAL H:161 H:164 3.0 0.019 -92.0 165.5 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 VAL D:161 D:164 1.0 0.006 -106.9 159.4 1.0 0.006 0.0
VAL H:161 H:164 0.0 0.0 -108.2 159.2 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 VAL D:161 D:164 3.0 0.019 -93.9 165.0 3.0 0.019 0.0 HOH
 6.202
 CG1
 O
VAL H:161 H:164 0.0 0.0 -97.9 157.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 VAL A:185 A:185 2.0 0.013 -76.9 143.6
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 VAL A:187 A:187 3.0 0.019 -82.2 145.2
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 VAL A:187 A:187 2.0 0.013 -76.9 142.8