Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 55086455 . T A CCDS12900.1:NM_006866.2:c.610Tat>Aat_NP_006857.1:p.204Y>N Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aee 4 A0A0G2JQ44 80.41 0.0 X-RAY
 2019-07-31 TYR G:182 G:183 51.0 0.222 T -108.9 15.0 51.0 0.222 0.0
TYR H:182 H:183 55.0 0.239 T -113.1 6.9 NA NA NA
2otp 1 Q8N149 99.49 6e-142 X-RAY
 2008-02-19 TYR A:181 A:181 196.0 0.852 S -114.1 -22.6 47.0 0.204 0.648 B:Q8N149:0.648
 HOH
 5.945
 CE2
 O
TYR B:181 B:181 219.0 0.952 S -96.0 22.0 51.0 0.222 0.73 A:Q8N149:0.73
 HOH
 3.750
 OH
 O
3d2u 3 Q8NHL6 80.81 2e-104 X-RAY
 2008-07-08 TYR C:183 D:183 53.0 0.23 E -104.9 15.3 53.0 0.23 0.0 HOH
 2.922
 N
 O
TYR F:183 H:183 56.0 0.243 T -107.1 14.5 NA NA NA
6k60 4 A0A0G2JQ44 81.12 3e-104 X-RAY
 2019-11-27 TYR D:184 D:183 60.0 0.261 E -107.9 -12.0 60.0 0.261 0.0
TYR H:184 H:183 51.0 0.222 T -122.4 -30.9 NA NA NA
1ugn 1 Q8NHL6 80.3 8e-104 X-RAY
 2004-08-10 TYR A:183 A:183 56.0 0.243 T -96.4 6.2 56.0 0.243 0.0 HOH
 2.600
 OH
 O
1g0x 1 Q8NHL6 80.71 1e-103 X-RAY
 2001-01-17 TYR A:182 A:183 57.0 0.248 T -105.4 9.1 57.0 0.248 0.0 HOH
 2.960
 N
 O
1p7q 4 Q8NHL6 80.71 1e-103 X-RAY
 2003-10-14 TYR D:182 D:183 56.0 0.243 E -86.6 11.9 56.0 0.243 0.0
1ufu 1 Q8NHL6 80.71 1e-103 X-RAY
 2004-08-10 TYR A:182 A:183 72.0 0.313 T -107.9 -6.5 72.0 0.313 0.0
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 TYR A:183 A:183 44.0 0.191 T -112.6 15.9 44.0 0.191 0.0 HOH
 3.069
 N
 O
TYR B:183 B:183 46.0 0.2 T -107.7 -0.9 46.0 0.2 0.0 HOH
 4.318
 OH
 O
4no0 4 Q8NHL6 80.51 5e-102 X-RAY
 2014-11-19 TYR D:180 D:183 51.0 0.222 T -106.1 0.2 51.0 0.222 0.0 HOH
 5.343
 N
 O
6ewa 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 TYR D:180 D:183 50.0 0.217 T -99.9 -2.9 50.0 0.217 0.0 HOH
 5.666
 N
 O
TYR H:180 H:183 35.0 0.152 T -109.4 -0.2 NA NA NA
6ewc 4 A0A0G2JQ44 80.51 5e-102 X-RAY
 2018-11-07 TYR D:180 D:183 47.0 0.204 T -116.7 4.0 47.0 0.204 0.0
TYR H:180 H:183 35.0 0.152 T -116.3 4.2 NA NA NA
6ewo 4 D9IDM8 80.51 5e-102 X-RAY
 2018-11-07 TYR D:180 D:183 46.0 0.2 T -96.7 3.6 46.0 0.2 0.0 HOH
 2.973
 N
 O
TYR H:180 H:183 45.0 0.196 T -106.2 6.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n149-f1 1 Q8N149 100.0 0.0 TYR A:204 A:204 42.0 0.183 T -101.5 3.9
af-q8n6c8-f1 1 Q8N6C8 81.84 0.0 TYR A:206 A:206 49.0 0.213 T -98.3 6.7
af-q8nhl6-f1 1 Q8NHL6 81.15 0.0 TYR A:206 A:206 47.0 0.204 T -104.6 4.9