Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55143094 | . | C | A | CCDS42614.1:NM_001081637.1:c.214Cgg>Agg_NP_001075106.1:p.72R>R | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 (LILRB1), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6zdx | 2 | A0A0G2JQ46 | 99.75 | 0.0 |
X-RAY |
2020-07-22 | ARG | B:80 | B:49 | 178.0 | 0.791 | G | -76.6 | 7.2 | 178.0 | 0.791 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | ARG | G:48 | G:49 | 191.0 | 0.849 | G | -99.1 | -6.8 | 191.0 | 0.849 | 0.0 | ||||||
ARG | H:48 | H:49 | 178.0 | 0.791 | T | -83.0 | 1.0 | NA | NA | NA | |||||||||||||
5knm | 3 | Q8NHL6 | 100.0 | 1e-142 |
X-RAY |
2017-06-14 | ARG | C:118 | D:49 | 74.0 | NA | T | -75.3 | -23.8 | 74.0 | NA | NA | ||||||
1vdg | 1 | Q8NHL6 | 100.0 | 5e-142 |
X-RAY |
2005-08-02 | ARG | A:49 | A:49 | 198.0 | 0.88 | G | -96.0 | 12.5 | 198.0 | 0.88 | 0.0 |
HOH |
6.351 |
NH1 |
O |
||
ARG | B:49 | B:49 | 174.0 | 0.773 | G | -86.9 | 0.6 | 174.0 | 0.773 | 0.0 |
HOH |
4.379 |
NH2 |
O |
|||||||||
3d2u | 3 | Q8NHL6 | 98.48 | 9e-140 |
X-RAY |
2008-07-08 | ARG | C:49 | D:49 | 174.0 | 0.773 | H | -94.1 | -10.3 | 174.0 | 0.773 | 0.0 |
HOH |
5.523 |
NH2 |
O |
||
ARG | F:49 | H:49 | 178.0 | 0.791 | G | -95.6 | -6.7 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 98.48 | 4e-139 |
X-RAY |
2019-11-27 | ARG | D:50 | D:49 | 177.0 | 0.787 | T | -97.7 | -29.0 | 158.0 | 0.702 | 0.085 |
B:P61769:0.084 |
|||||
ARG | H:50 | H:49 | 184.0 | 0.818 | T | -65.2 | -15.7 | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 97.98 | 4e-139 |
X-RAY |
2004-08-10 | ARG | A:49 | A:49 | 210.0 | 0.933 | T | -83.2 | -14.7 | 210.0 | 0.933 | 0.0 |
HOH |
2.597 |
NH1 |
O |
||
1g0x | 1 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2001-01-17 | ARG | A:48 | A:49 | 182.0 | 0.809 | T | -89.6 | -3.9 | 182.0 | 0.809 | 0.0 |
HOH |
2.519 |
NH2 |
O |
||
1p7q | 4 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2003-10-14 | ARG | D:48 | D:49 | 167.0 | 0.742 | T | -89.6 | -4.0 | 159.0 | 0.707 | 0.035 |
B:P61769:0.036 |
|||||
1ufu | 1 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2004-08-10 | ARG | A:48 | A:49 | 188.0 | 0.836 | G | -126.9 | -5.6 | 188.0 | 0.836 | 0.0 | ||||||
4no0 | 4 | Q8NHL6 | 98.46 | 6e-137 |
X-RAY |
2014-11-19 | ARG | D:46 | D:49 | 186.0 | 0.827 | G | -96.3 | 11.2 | 161.0 | 0.716 | 0.111 |
B:P61769:0.111 |
HOH |
7.536 |
NH1 |
O |
|
6ewa | 4 | D9IDM8 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | ARG | D:46 | D:49 | 178.0 | 0.791 | G | -117.9 | 14.5 | 159.0 | 0.707 | 0.084 |
B:P61769:0.084 |
|||||
ARG | H:46 | H:49 | 176.0 | 0.782 | T | -82.9 | -8.2 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | ARG | D:46 | D:49 | 181.0 | 0.804 | G | -124.1 | -12.3 | 167.0 | 0.742 | 0.062 |
B:P61769:0.062 |
|||||
ARG | H:46 | H:49 | 177.0 | 0.787 | G | -124.1 | -12.6 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | ARG | D:46 | D:49 | 172.0 | 0.764 | T | -91.6 | 33.2 | 150.0 | 0.667 | 0.097 |
B:P61769:0.098 |
HOH |
7.674 |
NH2 |
O |
|
ARG | H:46 | H:49 | 187.0 | 0.831 | T | -76.7 | -14.0 | NA | NA | NA | |||||||||||||
2gw5 | 1 | Q8N423 | 80.3 | 7e-103 |
X-RAY |
2006-06-20 | ARG | A:49 | A:49 | 88.0 | 0.391 | E | -100.7 | 125.4 | 88.0 | 0.391 | 0.0 |
IPA HOH |
8.648 2.867 |
N NH2 |
C3 O |
||
6bcs | 1 | A0A0G2JNQ7 | 80.3 | 7e-103 |
X-RAY |
2018-09-05 | ARG | A:50 | A:49 | 96.0 | 0.427 | E | -76.6 | 124.2 | 96.0 | 0.427 | 0.0 |
BEN HOH |
8.488 2.815 |
N N |
C3 O |
||
2otp | 1 | Q8N149 | 80.3 | 8e-103 |
X-RAY |
2008-02-19 | ARG | A:49 | A:49 | 152.0 | 0.676 | -77.3 | 84.3 | 152.0 | 0.676 | 0.0 |
HOH |
6.309 |
NH1 |
O |
|||
ARG | B:49 | B:49 | 163.0 | 0.724 | B | -109.7 | 146.8 | 163.0 | 0.724 | 0.0 |
HOH |
2.292 |
O |
O |
|||||||||
2dyp | 4 | Q8N423 | 80.61 | 1e-102 |
X-RAY |
2006-11-07 | ARG | D:49 | D:49 | 143.0 | 0.636 | S | -108.8 | -21.2 | 143.0 | 0.636 | 0.0 |
HOH |
6.153 |
CD |
O |
||
3q2c | 1 | Q8N6C8 | 89.69 | 4e-52 |
X-RAY |
2011-07-13 | ARG | A:49 | A:49 | 177.0 | 0.787 | G | -117.0 | -0.7 | 177.0 | 0.787 | 0.0 |
HOH |
3.049 |
NH1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 100.0 | 0.0 | ARG | A:72 | A:72 | 177.0 | 0.787 | G | -92.1 | -4.0 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 84.02 | 0.0 | ARG | A:72 | A:72 | 198.0 | 0.88 | G | -92.6 | -3.9 | |
af-o75019-f1 | 1 | O75019 | 80.48 | 0.0 | ARG | A:72 | A:72 | 180.0 | 0.8 | G | -89.6 | -7.0 |