Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 55143209 | . | G | A | CCDS42614.1:NM_001081637.1:c.329aGc>aAc_NP_001075106.1:p.110S>N | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 (LILRB1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6zdx | 2 | A0A0G2JQ46 | 99.75 | 0.0 |
X-RAY |
2020-07-22 | SER | B:118 | B:87 | 24.0 | 0.209 | -64.0 | 133.6 | 24.0 | 0.209 | 0.0 | |||||||
6aee | 4 | A0A0G2JQ44 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | SER | G:86 | G:87 | 20.0 | 0.174 | -65.1 | 151.0 | 17.0 | 0.148 | 0.026 |
A:P17693:0.026 |
||||||
SER | H:86 | H:87 | 27.0 | 0.235 | -72.9 | 142.9 | NA | NA | NA | ||||||||||||||
5knm | 3 | Q8NHL6 | 100.0 | 1e-142 |
X-RAY |
2017-06-14 | SER | C:156 | D:87 | 24.0 | 0.209 | -85.9 | 144.0 | 24.0 | 0.209 | 0.0 | |||||||
1vdg | 1 | Q8NHL6 | 100.0 | 5e-142 |
X-RAY |
2005-08-02 | SER | A:87 | A:87 | 20.0 | 0.174 | -74.7 | 146.2 | 20.0 | 0.174 | 0.0 |
HOH |
6.452 |
O |
O |
|||
SER | B:87 | B:87 | 36.0 | 0.313 | -79.2 | 146.9 | 36.0 | 0.313 | 0.0 |
HOH |
2.752 |
O |
O |
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3d2u | 3 | Q8NHL6 | 98.48 | 9e-140 |
X-RAY |
2008-07-08 | SER | C:87 | D:87 | 33.0 | 0.287 | -80.5 | 145.1 | 33.0 | 0.287 | 0.0 |
HOH |
5.012 |
OG |
O |
|||
SER | F:87 | H:87 | 36.0 | 0.313 | -73.9 | 143.7 | NA | NA | NA | ||||||||||||||
6k60 | 4 | A0A0G2JQ44 | 98.48 | 4e-139 |
X-RAY |
2019-11-27 | SER | D:88 | D:87 | 23.0 | 0.2 | -59.9 | 132.0 | 23.0 | 0.2 | 0.0 | |||||||
SER | H:88 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1ugn | 1 | Q8NHL6 | 97.98 | 4e-139 |
X-RAY |
2004-08-10 | SER | A:87 | A:87 | 24.0 | 0.209 | -76.7 | 147.2 | 24.0 | 0.209 | 0.0 |
HOH |
2.700 |
O |
O |
|||
1g0x | 1 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2001-01-17 | SER | A:86 | A:87 | 23.0 | 0.2 | -77.6 | 152.0 | 23.0 | 0.2 | 0.0 |
HOH |
2.662 |
O |
O |
|||
1p7q | 4 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2003-10-14 | SER | D:86 | D:87 | 38.0 | NA | -62.5 | 130.1 | 38.0 | NA | NA | |||||||
1ufu | 1 | Q8NHL6 | 98.48 | 6e-139 |
X-RAY |
2004-08-10 | SER | A:86 | A:87 | 25.0 | 0.217 | -70.6 | 162.7 | 25.0 | 0.217 | 0.0 | |||||||
4no0 | 4 | Q8NHL6 | 98.46 | 6e-137 |
X-RAY |
2014-11-19 | SER | D:84 | D:87 | 46.0 | 0.4 | -84.7 | 156.5 | 34.0 | 0.296 | 0.104 |
A:P01892:0.104 |
HOH |
9.117 |
CB |
O |
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6ewa | 4 | D9IDM8 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | SER | D:84 | D:87 | 40.0 | 0.348 | -68.1 | 146.2 | 37.0 | 0.322 | 0.026 |
A:P01892:0.026 |
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SER | H:84 | H:87 | 25.0 | 0.217 | -71.6 | 142.2 | NA | NA | NA | ||||||||||||||
6ewc | 4 | A0A0G2JQ44 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | SER | D:84 | D:87 | 32.0 | 0.278 | -65.1 | 146.4 | 30.0 | 0.261 | 0.017 |
A:P01892:0.017 |
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SER | H:84 | H:87 | 32.0 | 0.278 | -65.5 | 146.5 | NA | NA | NA | ||||||||||||||
6ewo | 4 | D9IDM8 | 98.46 | 6e-137 |
X-RAY |
2018-11-07 | SER | D:84 | D:87 | 27.0 | 0.235 | -64.5 | 132.9 | 21.0 | 0.183 | 0.052 |
A:P01892:0.052 |
||||||
SER | H:84 | H:87 | 54.0 | 0.47 | -71.4 | 144.4 | NA | NA | NA | ||||||||||||||
2gw5 | 1 | Q8N423 | 80.3 | 7e-103 |
X-RAY |
2006-06-20 | LEU | A:86 | A:87 | 90.0 | 0.529 | -59.8 | 135.3 | 90.0 | 0.529 | 0.0 |
IPA HOH |
3.034 2.709 |
CD1 N |
C1 O |
|||
6bcs | 1 | A0A0G2JNQ7 | 80.3 | 7e-103 |
X-RAY |
2018-09-05 | LEU | A:87 | A:87 | 76.0 | 0.447 | -67.7 | 149.9 | 76.0 | 0.447 | 0.0 |
BEN DMS HOH |
4.022 8.294 2.943 |
CD1 CD1 N |
C2 S O |
|||
2otp | 1 | Q8N149 | 80.3 | 8e-103 |
X-RAY |
2008-02-19 | TYR | A:85 | A:85 | 82.0 | 0.357 | -51.7 | 174.4 | 82.0 | 0.357 | 0.0 |
HOH |
6.028 |
O |
O |
|||
TYR | B:85 | B:85 | 142.0 | 0.617 | -69.1 | 113.6 | 142.0 | 0.617 | 0.0 |
HOH |
3.296 |
OH |
O |
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2dyp | 4 | Q8N423 | 80.61 | 1e-102 |
X-RAY |
2006-11-07 | LEU | D:86 | D:86 | 95.0 | 0.559 | -70.0 | 144.9 | 95.0 | 0.559 | 0.0 |
HOH |
6.191 |
CG |
O |
|||
3q2c | 1 | Q8N6C8 | 89.69 | 4e-52 |
X-RAY |
2011-07-13 | SER | A:87 | A:87 | 52.0 | 0.452 | -59.5 | 135.1 | 52.0 | 0.452 | 0.0 |
HOH |
4.515 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8nhl6-f1 | 1 | Q8NHL6 | 100.0 | 0.0 | SER | A:110 | A:110 | 38.0 | 0.33 | -69.5 | 141.5 | ||
af-q8n6c8-f1 | 1 | Q8N6C8 | 84.02 | 0.0 | SER | A:110 | A:110 | 48.0 | 0.417 | -68.5 | 141.1 | ||
af-o75019-f1 | 1 | O75019 | 80.48 | 0.0 | PRO | A:110 | A:110 | 50.0 | 0.345 | -64.6 | 144.9 |