Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 617796 . T A CCDS12036.1:NM_005035.3:c.3476gAt>gTt_NP_005026.3:p.1159D>V Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ASP A:1072 A:1159 16.0 0.107 S -105.6 21.6 16.0 0.107 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ASP G:1057 A:1159 14.0 0.093 G -127.2 20.7 14.0 0.093 0.0
ASP H:1057 B:1159 16.0 0.107 G -126.2 20.4 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ASP G:1057 A:1159 13.0 0.087 G -127.0 19.3 13.0 0.087 0.0
ASP H:1057 B:1159 17.0 0.113 G -127.0 19.1 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ASP A:1063 A:1159 8.0 0.053 G -117.1 25.9 8.0 0.053 0.0 HOH
 2.648
 OD2
 O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ASP A:1017 A:1159 19.0 0.127 G -126.9 18.3 19.0 0.127 0.0 HOH
 2.702
 OD2
 O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ASP E:1017 E:1159 12.0 0.08 G -120.0 6.7 12.0 0.08 0.0
ASP I:1017 F:1159 13.0 0.087 G -120.8 8.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ASP A:1159 A:1159 13.0 0.087 G -109.6 1.5