Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 618560 . T A CCDS12036.1:NM_005035.3:c.3350aAc>aTc_NP_005026.3:p.1117N>I Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ASN A:1030 A:1117 98.0 0.613 H -79.0 -20.7 98.0 0.613 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ASN G:1015 A:1117 38.0 0.237 H -69.1 -23.6 38.0 0.237 0.0 DT
DA
DC
 7.831
6.509
7.334
 OD1
OD1
ND2
 O3'
OP1
O3'
ASN H:1015 B:1117 54.0 0.338 H -69.7 -24.1 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ASN G:1015 A:1117 29.0 0.181 H -68.8 -26.5 29.0 0.181 0.0 DC
DA
DC
 7.636
6.626
7.079
 OD1
OD1
ND2
 O3'
OP1
O3'
ASN H:1015 B:1117 46.0 0.287 H -69.1 -26.8 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ASN A:1021 A:1117 66.0 0.412 H -75.0 -26.6 66.0 0.412 0.0 HOH
 6.345
 O
 O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ASN A:975 A:1117 73.0 0.456 H -67.5 -30.4 73.0 0.456 0.0 DG
DC
DC
DG
DT
DG
DC
HOH
 7.114
6.332
7.598
7.707
7.069
6.919
7.312
2.804
 OD1
OD1
ND2
ND2
ND2
O
CB
O
 O3'
OP1
OP1
O3'
O4'
C4'
OP1
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ASN E:975 E:1117 91.0 0.569 H -82.4 -27.0 91.0 0.569 0.0 DC
DC
DA
DG
DG
DC
DG
DT
DG
DC
 9.881
7.704
7.465
9.649
9.663
6.170
4.745
5.885
4.394
7.583
 OD1
OD1
ND2
ND2
ND2
ND2
ND2
O
O
C
 O3'
C4'
C5'
OP1
N2
O3'
C5'
O3'
C5'
OP1
ASN I:975 F:1117 63.0 0.394 H -81.6 -27.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ASN A:1117 A:1117 61.0 0.381 H -76.4 -25.9