Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 618573 . G A CCDS12036.1:NM_005035.3:c.3337Cgt>Tgt_NP_005026.3:p.1113R>C Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ARG A:1026 A:1113 137.0 0.609 360.0 148.8 137.0 0.609 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:1011 A:1113 157.0 0.698 H -66.7 -53.5 157.0 0.698 0.0 DG
DA
DT
DA
DG
DA
DT
DC
 6.141
6.331
6.519
5.699
5.798
7.605
4.415
3.217
 NH2
NH1
NH1
CG
N
NH1
NH1
NH1
 N2
C2
O2
C5'
OP1
C2
O2
O4'
ARG H:1011 B:1113 159.0 0.707 H -68.5 -53.6 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:1011 A:1113 155.0 0.689 H -62.1 -55.4 155.0 0.689 0.0 DG
DA
DC
DA
DG
DG
DT
DC
 5.951
6.405
6.842
5.887
5.695
6.865
4.457
2.828
 NH2
NH1
NH1
CB
N
NH1
NH1
NH1
 N2
C2
O2
C5'
OP1
N2
O2
O4'
ARG H:1011 B:1113 159.0 0.707 H -64.0 -55.5 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ARG A:1017 A:1113 177.0 0.787 H -54.3 -48.6 177.0 0.787 0.0 HOH
 3.340
 N
 O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ARG A:971 A:1113 178.0 0.791 H -65.4 -55.4 178.0 0.791 0.0 DA
DC
DG
DC
DC
DA
DG
DG
DC
DG
DT
DG
DC
HOH
 6.873
6.322
3.093
5.375
4.881
9.445
9.791
6.318
3.703
2.898
3.931
7.769
8.334
3.788
 NH2
NH2
NH1
CD
N
N
NH1
NH1
NH1
NH1
NH2
NH2
O
N
 N1
O2
N2
O4'
OP1
O5'
N2
N2
O2
O4'
O4'
OP2
OP1
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ARG E:971 E:1113 175.0 0.778 H -70.5 -51.2 175.0 0.778 0.0 DG
DC
DC
DA
DG
DA
DT
DG
DG
DC
DG
DT
DG
DC
 7.157
6.364
5.241
3.752
4.133
9.526
9.528
5.351
4.371
3.533
6.229
8.794
7.784
8.961
 NH2
NH2
NH2
CG
CG
CD
NH1
NH2
NH2
NH2
NH2
O
O
O
 N2
O2
O2
C5'
OP1
P
O2
N2
N2
O4'
C5'
O3'
O5'
OP1
ARG I:971 F:1113 136.0 0.604 H -69.3 -51.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ARG A:1113 A:1113 188.0 0.836 H -62.8 -45.4