Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 619089 . G A CCDS12036.1:NM_005035.3:c.3175Cgc>Tgc_NP_005026.3:p.1059R>C Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ARG A:972 A:1059 103.0 0.458 H -60.7 -44.4 103.0 0.458 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:957 A:1059 87.0 0.387 H -56.7 -47.5 87.0 0.387 0.0 DA
DT
DA
DG
 9.455
6.170
3.790
6.405
 NH2
NH2
NH1
O
 O3'
O3'
OP1
OP1
ARG H:957 B:1059 113.0 0.502 H -56.7 -48.8 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:957 A:1059 89.0 0.396 H -57.6 -46.9 89.0 0.396 0.0 DA
DC
DA
DG
 9.069
5.730
3.365
6.328
 NH2
NH1
NH1
O
 O3'
O3'
OP1
OP1
ARG H:957 B:1059 112.0 0.498 H -57.6 -47.5 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ARG A:963 A:1059 69.0 0.307 H -59.9 -44.6 69.0 0.307 0.0 HOH
 5.179
 CG
 O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ARG A:917 A:1059 93.0 0.413 H -52.4 -46.3 93.0 0.413 0.0 DG
DC
DC
HOH
 9.017
5.155
3.292
7.449
 NE
NE
NE
CG
 O3'
O3'
OP2
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ARG E:917 E:1059 95.0 0.422 H -61.1 -49.2 95.0 0.422 0.0 DC
DC
DA
DG
DG
 5.716
4.119
4.257
8.196
9.609
 NH1
NH1
CG
O
NH2
 O3'
OP1
OP1
OP1
C5'
ARG I:917 F:1059 138.0 0.613 H -60.8 -49.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ARG A:1059 A:1059 65.0 0.289 H -61.7 -49.3