Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 619615 . G A CCDS12036.1:NM_005035.3:c.3037Cgc>Tgc_NP_005026.3:p.1013R>C Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ARG A:926 A:1013 93.0 0.413 H -58.0 -39.5 93.0 0.413 0.0 R4Q
 8.029
 NH2
 O32
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:911 A:1013 91.0 0.404 H -62.2 -29.8 91.0 0.404 0.0
ARG H:911 B:1013 70.0 0.311 H -62.6 -29.9 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:911 A:1013 89.0 0.396 H -57.9 -32.0 89.0 0.396 0.0
ARG H:911 B:1013 78.0 0.347 H -57.9 -31.4 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ARG A:917 A:1013 59.0 0.262 H -63.2 -29.7 59.0 0.262 0.0 SO4
HOH
 8.239
2.760
 NH1
NH1
 O3
O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ARG A:871 A:1013 51.0 0.227 H -76.5 -27.2 51.0 0.227 0.0 C
G
C
G
C
DG
HOH
 8.621
6.386
5.559
7.981
8.431
8.987
2.767
 NH2
NH2
NH2
NH1
NH1
NH1
NH1
 O3'
OP1
OP2
OP2
N4
O6
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ARG E:871 E:1013 54.0 0.24 H -92.3 -6.2 54.0 0.24 0.0 DT
 8.289
 NH1
 O4
ARG I:871 F:1013 43.0 0.191 H -91.1 -6.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ARG A:1013 A:1013 26.0 0.116 H -67.7 -38.7