Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 620005 . C A CCDS12036.1:NM_005035.3:c.2839Gag>Tag_NP_005026.3:p.947E>* Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
2020-12-30 GLU A:860 A:947 43.0 0.226 S -84.0 149.6 43.0 0.226 0.0
6erp 4 O00411 99.91 0.0 X-RAY
2017-11-15 GLU G:845 A:947 76.0 0.4 S -81.5 131.0 76.0 0.4 0.0
GLU H:845 B:947 75.0 0.395 S -81.9 130.1 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
2017-11-15 GLU G:845 A:947 74.0 0.389 S -81.4 130.5 74.0 0.389 0.0
GLU H:845 B:947 74.0 0.389 S -81.4 130.0 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
2011-09-28 GLU A:851 A:947 88.0 0.463 S -79.3 127.6 88.0 0.463 0.0 HOH
3.698
O
O
4boc 1 O00411 100.0 0.0 X-RAY
2013-09-25 GLU A:805 A:947 79.0 0.416 S -80.4 128.7 79.0 0.416 0.0 HOH
2.657
O
O
5ola 2 O00411 99.91 0.0 X-RAY
2017-10-18 GLU E:805 E:947 75.0 0.395 S -88.2 139.2 75.0 0.395 0.0
GLU I:805 F:947 71.0 0.374 S -89.2 140.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 GLU A:947 A:947 79.0 0.416 S -77.3 133.6