Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 620005 | . | C | A | CCDS12036.1:NM_005035.3:c.2839Gag>Tag_NP_005026.3:p.947E>* | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | GLU | A:860 | A:947 | 43.0 | 0.226 | S | -84.0 | 149.6 | 43.0 | 0.226 | 0.0 | ||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | GLU | G:845 | A:947 | 76.0 | 0.4 | S | -81.5 | 131.0 | 76.0 | 0.4 | 0.0 | ||||||
GLU | H:845 | B:947 | 75.0 | 0.395 | S | -81.9 | 130.1 | NA | NA | NA | |||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | GLU | G:845 | A:947 | 74.0 | 0.389 | S | -81.4 | 130.5 | 74.0 | 0.389 | 0.0 | ||||||
GLU | H:845 | B:947 | 74.0 | 0.389 | S | -81.4 | 130.0 | NA | NA | NA | |||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | GLU | A:851 | A:947 | 88.0 | 0.463 | S | -79.3 | 127.6 | 88.0 | 0.463 | 0.0 |
HOH |
3.698 |
O |
O |
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4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | GLU | A:805 | A:947 | 79.0 | 0.416 | S | -80.4 | 128.7 | 79.0 | 0.416 | 0.0 |
HOH |
2.657 |
O |
O |
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5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | GLU | E:805 | E:947 | 75.0 | 0.395 | S | -88.2 | 139.2 | 75.0 | 0.395 | 0.0 | ||||||
GLU | I:805 | F:947 | 71.0 | 0.374 | S | -89.2 | 140.0 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | GLU | A:947 | A:947 | 79.0 | 0.416 | S | -77.3 | 133.6 |