Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 620477 | . | C | A | CCDS12036.1:NM_005035.3:c.2651tGg>tTg_NP_005026.3:p.884W>L | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | TRP | A:797 | A:884 | 43.0 | 0.169 | T | -55.3 | -43.5 | 43.0 | 0.169 | 0.0 | ||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | TRP | G:782 | A:884 | 54.0 | 0.212 | -63.9 | -38.9 | 54.0 | 0.212 | 0.0 | |||||||
TRP | H:782 | B:884 | 53.0 | 0.208 | -63.4 | -39.8 | NA | NA | NA | ||||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | TRP | G:782 | A:884 | 55.0 | 0.216 | G | -61.3 | -40.6 | 55.0 | 0.216 | 0.0 | ||||||
TRP | H:782 | B:884 | 48.0 | 0.188 | G | -60.5 | -40.8 | NA | NA | NA | |||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | TRP | A:788 | A:884 | 52.0 | 0.204 | G | -57.5 | -37.5 | 52.0 | 0.204 | 0.0 |
HOH |
2.662 |
O |
O |
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4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | TRP | A:742 | A:884 | 54.0 | 0.212 | G | -59.9 | -39.2 | 54.0 | 0.212 | 0.0 |
HOH |
2.983 |
N |
O |
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5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | TRP | E:742 | E:884 | 48.0 | 0.188 | -71.5 | -30.5 | 48.0 | 0.188 | 0.0 | |||||||
TRP | I:742 | F:884 | 55.0 | 0.216 | -71.9 | -30.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | TRP | A:884 | A:884 | 55.0 | 0.216 | G | -54.1 | -42.0 |