Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 621234 . G A CCDS12036.1:NM_005035.3:c.2464Cgg>Tgg_NP_005026.3:p.822R>W Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ARG A:735 A:822 26.0 0.116 H -65.0 -35.3 26.0 0.116 0.0 R4Q
 5.333
 N
 CL1
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:720 A:822 60.0 0.267 H -64.7 -30.5 60.0 0.267 0.0
ARG H:720 B:822 61.0 0.271 H -65.6 -30.6 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:720 A:822 64.0 0.284 H -65.0 -31.3 64.0 0.284 0.0
ARG H:720 B:822 62.0 0.276 H -66.1 -31.0 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ARG A:726 A:822 45.0 0.2 H -63.3 -37.5 45.0 0.2 0.0 GOL
HOH
 7.398
2.707
 N
O
 O2
O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ARG A:680 A:822 58.0 0.258 H -67.7 -24.8 58.0 0.258 0.0 C
G
C
DG
HOH
 6.858
3.125
3.585
8.160
3.919
 NH2
NH2
NH1
NH2
O
 O2'
O3'
OP1
N2
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ARG E:680 E:822 59.0 0.262 H -65.4 -42.7 59.0 0.262 0.0 C
G
C
DG
 7.665
2.826
3.010
9.734
 NH2
NH2
NH2
NH2
 O3'
O3'
OP1
N2
ARG I:680 F:822 57.0 0.253 H -65.5 -43.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ARG A:822 A:822 58.0 0.258 H -71.3 -45.3