Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 621278 . T A CCDS12036.1:NM_005035.3:c.2420tAc>tTc_NP_005026.3:p.807Y>F Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 TYR A:720 A:807 49.0 0.213 E -142.6 140.5 49.0 0.213 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 TYR G:705 A:807 68.0 0.296 E -142.5 141.7 68.0 0.296 0.0
TYR H:705 B:807 57.0 0.248 E -142.6 141.6 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 TYR G:705 A:807 66.0 0.287 E -141.0 139.4 66.0 0.287 0.0
TYR H:705 B:807 59.0 0.257 E -140.8 138.9 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 TYR A:711 A:807 38.0 0.165 E -147.4 143.7 38.0 0.165 0.0 HOH
 3.179
 OH
 O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 TYR A:665 A:807 56.0 0.243 E -144.5 145.0 56.0 0.243 0.0 G
C
DG
DC
DG
DC
DG
HOH
 6.132
7.953
8.330
6.093
3.424
5.794
9.921
2.722
 OH
OH
OH
OH
OH
CD1
CB
OH
 N2
O2
N2
O3'
C4'
C5'
P
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 TYR E:665 E:807 53.0 0.23 E -146.0 142.8 53.0 0.23 0.0 C
G
C
DG
DC
DG
DC
 9.691
4.350
6.197
6.050
4.088
3.350
6.328
 CE1
CE1
OH
OH
OH
OH
CB
 O2
N2
O2
N2
O2
O4'
C5'
TYR I:665 F:807 53.0 0.23 E -145.4 140.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 TYR A:807 A:807 52.0 0.226 E -151.8 154.3