Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 621657 | . | G | A | CCDS12036.1:NM_005035.3:c.2041Cag>Tag_NP_005026.3:p.681Q>* | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | GLN | A:594 | A:681 | 29.0 | 0.161 | H | -70.0 | -40.9 | 29.0 | 0.161 | 0.0 | ||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | GLN | G:579 | A:681 | 85.0 | 0.472 | H | -63.0 | -48.4 | 85.0 | 0.472 | 0.0 | ||||||
GLN | H:579 | B:681 | 57.0 | 0.317 | H | -63.3 | -48.6 | NA | NA | NA | |||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | GLN | G:579 | A:681 | 86.0 | 0.478 | H | -64.3 | -48.7 | 86.0 | 0.478 | 0.0 | ||||||
GLN | H:579 | B:681 | 57.0 | 0.317 | H | -64.5 | -49.2 | NA | NA | NA | |||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | GLN | A:585 | A:681 | 16.0 | 0.089 | H | -57.7 | -39.9 | 16.0 | 0.089 | 0.0 | ||||||
4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | GLN | A:539 | A:681 | 68.0 | 0.378 | H | -61.3 | -45.5 | 68.0 | 0.378 | 0.0 |
HOH |
3.880 |
N |
O |
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5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | GLN | E:539 | E:681 | 81.0 | 0.45 | H | -60.9 | -40.0 | 81.0 | 0.45 | 0.0 | ||||||
GLN | I:539 | F:681 | 50.0 | 0.278 | H | -66.9 | -40.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | GLN | A:681 | A:681 | 36.0 | 0.2 | H | -62.2 | -42.1 |