Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 621775 . G A CCDS12036.1:NM_005035.3:c.1923ttC>ttT_NP_005026.3:p.641F>F Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 PHE A:554 A:641 9.0 0.043 E -133.1 157.2 9.0 0.043 0.0 R4Q
 8.579
 CE2
 C11
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 PHE G:539 A:641 14.0 0.067 E -125.3 154.7 14.0 0.067 0.0
PHE H:539 B:641 13.0 0.062 E -125.8 154.4 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 PHE G:539 A:641 14.0 0.067 E -128.4 154.6 14.0 0.067 0.0
PHE H:539 B:641 15.0 0.071 E -128.7 154.4 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 PHE A:545 A:641 10.0 0.048 E -130.8 154.2 10.0 0.048 0.0 CL
HOH
 8.553
4.826
 O
CD1
 CL
O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 PHE A:499 A:641 16.0 0.076 E -129.2 158.7 16.0 0.076 0.0 DG
DC
DC
HOH
 7.523
6.115
9.943
3.543
 CE2
CE2
CE2
CA
 O3'
OP1
OP1
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 PHE E:499 E:641 12.0 0.057 E -121.4 155.6 12.0 0.057 0.0 DG
DC
DC
 7.302
6.359
9.557
 CE1
CE1
CE1
 O3'
OP1
OP1
PHE I:499 F:641 13.0 0.062 E -120.9 155.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 PHE A:641 A:641 13.0 0.062 E -113.7 156.1