Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 621822 . C A CCDS12036.1:NM_005035.3:c.1876Gcc>Tcc_NP_005026.3:p.626A>S Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ALA A:539 A:626 54.0 0.47 H -62.1 -38.5 54.0 0.47 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ALA G:524 A:626 8.0 0.07 H -63.5 -35.6 2.0 0.017 0.053 I:Q9H5Q4:0.052
ALA H:524 B:626 17.0 0.148 H -63.9 -35.1 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ALA G:524 A:626 11.0 0.096 H -61.2 -36.7 3.0 0.026 0.07 I:Q9H5Q4:0.07
ALA H:524 B:626 29.0 0.252 H -60.9 -35.0 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ALA A:530 A:626 40.0 0.348 H -72.6 -38.6 40.0 0.348 0.0
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ALA A:484 A:626 23.0 0.2 H -65.7 -39.3 23.0 0.2 0.0 DT
DG
DG
HOH
 9.619
5.704
4.511
7.444
 CA
CB
CB
CB
 O3'
O3'
OP1
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ALA E:484 E:626 11.0 0.096 H -65.9 -36.7 11.0 0.096 0.0 DG
 9.499
 CA
 OP1
ALA I:484 F:626 12.0 0.104 H -65.5 -35.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ALA A:626 A:626 16.0 0.139 H -65.9 -31.5