Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 622168 . G A CCDS12036.1:NM_005035.3:c.1832tCc>tTc_NP_005026.3:p.611S>F Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 SER A:524 NA:NA DO NA DO DO DO NA NA NA
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 SER G:509 A:611 61.0 0.53 E -106.2 126.8 29.0 0.252 0.278 I:Q9H5Q4:0.278
 DC
DG
DG
 9.824
7.186
7.646
 O
O
O
 O2
C4'
C5'
SER H:509 B:611 46.0 0.4 E -105.0 126.6 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 SER G:509 A:611 55.0 0.478 E -109.3 127.1 21.0 0.183 0.295 I:Q9H5Q4:0.296
 DA
DT
DT
DT
DT
 9.090
9.754
9.498
7.257
7.701
 O
O
C
O
O
 C2
C5'
OP1
C4'
C5'
SER H:509 B:611 56.0 0.487 E -109.6 126.5 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 SER A:515 A:611 77.0 0.67 -72.9 360.0 77.0 0.67 0.0
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 SER A:469 A:611 43.0 0.374 E -84.1 115.0 43.0 0.374 0.0 G
C
G
DG
DC
DT
HOH
 3.552
5.339
7.947
5.386
3.269
4.760
4.986
 OG
OG
OG
OG
OG
CA
O
 N2
O2
O4'
N2
O2
OP2
O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 SER E:469 E:611 54.0 0.47 E -102.2 -178.6 43.0 0.374 0.096 A:Q96QE5:0.096
 G
DC
DT
 9.336
7.030
6.073
 C
CB
OG
 N2
C2'
OP2
SER I:469 F:611 45.0 0.391 E -101.3 -178.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 SER A:611 A:611 19.0 0.165 E -114.9 133.9