Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 622328 | . | C | A | CCDS12036.1:NM_005035.3:c.1672Gcg>Tcg_NP_005026.3:p.558A>S | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | ALA | A:471 | A:558 | 33.0 | 0.287 | -91.5 | 127.8 | 33.0 | 0.287 | 0.0 | |||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | ALA | G:456 | A:558 | 28.0 | 0.243 | -126.8 | 98.1 | 28.0 | 0.243 | 0.0 | |||||||
ALA | H:456 | B:558 | 23.0 | 0.2 | -131.8 | 95.9 | NA | NA | NA | ||||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | ALA | G:456 | A:558 | 26.0 | 0.226 | -127.8 | 95.8 | 26.0 | 0.226 | 0.0 | |||||||
ALA | H:456 | B:558 | 24.0 | 0.209 | -131.3 | 94.4 | NA | NA | NA | ||||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | ALA | A:462 | A:558 | 33.0 | 0.287 | -62.6 | 116.2 | 33.0 | 0.287 | 0.0 | |||||||
4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | ALA | A:416 | A:558 | 33.0 | 0.287 | -140.7 | 85.1 | 33.0 | 0.287 | 0.0 |
HOH |
7.676 |
CA |
O |
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5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | ALA | E:416 | E:558 | 41.0 | 0.357 | -113.6 | 140.3 | 41.0 | 0.357 | 0.0 | |||||||
ALA | I:416 | F:558 | 41.0 | 0.357 | 69.4 | 45.3 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | ALA | A:558 | A:558 | 58.0 | 0.504 | -116.0 | 119.2 |