Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 622336 | . | T | A | CCDS12036.1:NM_005035.3:c.1664gAg>gTg_NP_005026.3:p.555E>V | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | ALA | A:468 | A:555 | 75.0 | 0.652 | H | -64.9 | -42.4 | 75.0 | 0.652 | 0.0 | ||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | ALA | G:453 | A:555 | 70.0 | 0.609 | H | -69.9 | -40.3 | 70.0 | 0.609 | 0.0 | ||||||
ALA | H:453 | B:555 | 77.0 | 0.67 | H | -69.9 | -38.5 | NA | NA | NA | |||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | ALA | G:453 | A:555 | 71.0 | 0.617 | H | -68.4 | -40.9 | 71.0 | 0.617 | 0.0 | ||||||
ALA | H:453 | B:555 | 76.0 | 0.661 | H | -68.5 | -39.5 | NA | NA | NA | |||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | ALA | A:459 | A:555 | 81.0 | 0.704 | H | -60.7 | -34.6 | 81.0 | 0.704 | 0.0 |
HOH |
8.467 |
CB |
O |
||
4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | GLU | A:413 | A:555 | 121.0 | 0.637 | H | -66.5 | -45.1 | 121.0 | 0.637 | 0.0 |
HOH |
7.768 |
OE2 |
O |
||
5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | ALA | E:413 | E:555 | 77.0 | 0.67 | H | -74.0 | -25.4 | 77.0 | 0.67 | 0.0 | ||||||
ALA | I:413 | F:555 | 86.0 | 0.748 | H | -74.4 | -27.0 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | GLU | A:555 | A:555 | 118.0 | 0.621 | H | -65.1 | -36.4 |