Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 622352 | . | G | A | CCDS12036.1:NM_005035.3:c.1648Cgg>Tgg_NP_005026.3:p.550R>W | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | ARG | A:463 | A:550 | 11.0 | 0.049 | H | -62.5 | -41.7 | 11.0 | 0.049 | 0.0 | ||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | ARG | G:448 | A:550 | 4.0 | 0.018 | H | -64.9 | -43.0 | 4.0 | 0.018 | 0.0 | ||||||
ARG | H:448 | B:550 | 5.0 | 0.022 | H | -64.6 | -42.2 | NA | NA | NA | |||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | ARG | G:448 | A:550 | 5.0 | 0.022 | H | -65.1 | -43.3 | 5.0 | 0.022 | 0.0 | ||||||
ARG | H:448 | B:550 | 6.0 | 0.027 | H | -64.9 | -42.7 | NA | NA | NA | |||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | ARG | A:454 | A:550 | 8.0 | 0.036 | H | -62.6 | -43.4 | 8.0 | 0.036 | 0.0 |
HOH |
7.369 |
N |
O |
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4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | ARG | A:408 | A:550 | 5.0 | 0.022 | H | -63.9 | -41.5 | 5.0 | 0.022 | 0.0 |
HOH |
3.387 |
NH2 |
O |
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5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | ARG | E:408 | E:550 | 4.0 | 0.018 | H | -63.4 | -42.2 | 4.0 | 0.018 | 0.0 | ||||||
ARG | I:408 | F:550 | 9.0 | 0.04 | H | -63.9 | -43.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | ARG | A:550 | A:550 | 6.0 | 0.027 | H | -66.0 | -43.8 |