Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 622592 . G A CCDS12036.1:NM_005035.3:c.1616tCc>tTc_NP_005026.3:p.539S>F Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 SER A:452 A:539 58.0 0.504 S -73.8 -52.9 58.0 0.504 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 SER G:437 A:539 62.0 0.539 T -73.1 -40.6 62.0 0.539 0.0
SER H:437 B:539 61.0 0.53 T -74.6 -42.2 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 SER G:437 A:539 61.0 0.53 T -74.8 -40.8 61.0 0.53 0.0
SER H:437 B:539 61.0 0.53 T -75.2 -41.7 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 SER A:443 A:539 54.0 0.47 S -63.5 -42.0 54.0 0.47 0.0 CL
 9.263
 CB
 CL
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 SER A:397 A:539 63.0 0.548 T -68.3 -40.7 63.0 0.548 0.0 HOH
 4.176
 CB
 O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 SER E:397 E:539 59.0 0.513 T -80.6 -39.0 59.0 0.513 0.0
SER I:397 F:539 61.0 0.53 T -79.9 -38.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 SER A:539 A:539 61.0 0.53 T -68.5 -28.8