Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 622681 | . | G | A | CCDS12036.1:NM_005035.3:c.1527ttC>ttT_NP_005026.3:p.509F>F | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | PHE | A:422 | A:509 | 39.0 | 0.186 | H | -63.1 | -43.2 | 39.0 | 0.186 | 0.0 | ||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | PHE | G:407 | A:509 | 29.0 | 0.138 | H | -57.9 | -44.7 | 29.0 | 0.138 | 0.0 | ||||||
PHE | H:407 | B:509 | 34.0 | 0.162 | H | -58.2 | -44.9 | NA | NA | NA | |||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | PHE | G:407 | A:509 | 28.0 | 0.133 | H | -58.5 | -45.2 | 28.0 | 0.133 | 0.0 | ||||||
PHE | H:407 | B:509 | 33.0 | 0.157 | H | -58.7 | -45.7 | NA | NA | NA | |||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | PHE | A:413 | A:509 | 15.0 | 0.071 | H | -61.2 | -51.7 | 15.0 | 0.071 | 0.0 | ||||||
4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | PHE | A:367 | A:509 | 32.0 | 0.152 | H | -57.4 | -47.3 | 32.0 | 0.152 | 0.0 | ||||||
5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | PHE | E:367 | E:509 | 22.0 | 0.105 | H | -62.2 | -40.2 | 22.0 | 0.105 | 0.0 | ||||||
PHE | I:367 | F:509 | 36.0 | 0.171 | H | -62.1 | -40.8 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | PHE | A:509 | A:509 | 27.0 | 0.129 | H | -62.1 | -46.1 |