Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 622709 | . | A | C | CCDS12036.1:NM_005035.3:c.1499cTg>cGg_NP_005026.3:p.500L>R | Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7a8p | 1 | O00411 | 99.91 | 0.0 |
EM |
2020-12-30 | LEU | A:413 | A:500 | 14.0 | 0.082 | H | -65.1 | -41.9 | 14.0 | 0.082 | 0.0 | ||||||
6erp | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | LEU | G:398 | A:500 | 5.0 | 0.029 | H | -61.3 | -41.3 | 5.0 | 0.029 | 0.0 |
DG |
9.671 |
N |
N1 |
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LEU | H:398 | B:500 | 3.0 | 0.018 | H | -60.3 | -41.7 | NA | NA | NA | |||||||||||||
6erq | 4 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-11-15 | LEU | G:398 | A:500 | 6.0 | 0.035 | H | -58.7 | -44.0 | 6.0 | 0.035 | 0.0 |
DG DT |
9.808 9.513 |
N N |
N1 OP1 |
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LEU | H:398 | B:500 | 5.0 | 0.029 | H | -58.0 | -44.0 | NA | NA | NA | |||||||||||||
3spa | 1 | O00411 | 99.91 | 0.0 |
X-RAY |
2011-09-28 | LEU | A:404 | A:500 | 10.0 | 0.059 | H | -67.5 | -37.5 | 10.0 | 0.059 | 0.0 | ||||||
4boc | 1 | O00411 | 100.0 | 0.0 |
X-RAY |
2013-09-25 | LEU | A:358 | A:500 | 3.0 | 0.018 | H | -59.3 | -42.4 | 3.0 | 0.018 | 0.0 |
G DC HOH |
8.421 9.484 4.874 |
N N CD1 |
N7 N4 O |
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5ola | 2 | O00411 | 99.91 | 0.0 |
X-RAY |
2017-10-18 | LEU | E:358 | E:500 | 4.0 | 0.024 | H | -63.2 | -41.0 | 4.0 | 0.024 | 0.0 |
G |
8.248 |
N |
OP1 |
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LEU | I:358 | F:500 | 4.0 | 0.024 | H | -64.5 | -42.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00411-f1 | 1 | O00411 | 100.0 | 0.0 | LEU | A:500 | A:500 | 2.0 | 0.012 | H | -59.2 | -40.0 |