Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 623482 . G A CCDS12036.1:NM_005035.3:c.1262aCg>aTg_NP_005026.3:p.421T>M Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
2020-12-30 THR A:334 A:421 127.0 0.907 -72.7 -36.2 127.0 0.907 0.0
6erp 4 O00411 99.91 0.0 X-RAY
2017-11-15 THR G:319 A:421 123.0 0.879 S -110.3 154.6 123.0 0.879 0.0
THR H:319 B:421 124.0 0.886 S -109.7 154.5 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
2017-11-15 THR G:319 A:421 125.0 0.893 -71.8 153.2 125.0 0.893 0.0
THR H:319 B:421 112.0 0.8 -145.4 159.1 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
2011-09-28 THR A:325 A:421 98.0 0.7 -75.4 139.2 98.0 0.7 0.0 HOH
6.335
N
O
4boc 1 O00411 100.0 0.0 X-RAY
2013-09-25 THR A:279 A:421 129.0 0.921 -136.0 79.2 129.0 0.921 0.0 HOH
3.451
N
O
5ola 2 O00411 99.91 0.0 X-RAY
2017-10-18 THR E:279 E:421 132.0 0.943 -67.0 88.7 132.0 0.943 0.0
THR I:279 F:421 92.0 0.657 -102.0 -145.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 THR A:421 A:421 95.0 0.679 -83.5 139.0