Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 623495 . C A CCDS12036.1:NM_005035.3:c.1249Gtg>Ttg_NP_005026.3:p.417V>L Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 VAL A:330 A:417 11.0 0.071 -101.5 45.5 11.0 0.071 0.0 R4Q
 9.219
 CG2
 C05
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 VAL G:315 A:417 11.0 0.071 S -92.1 20.2 11.0 0.071 0.0
VAL H:315 B:417 16.0 0.103 S -94.3 20.0 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 VAL G:315 A:417 13.0 0.084 -67.3 -47.1 13.0 0.084 0.0
VAL H:315 B:417 21.0 0.135 S -76.7 -44.7 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 VAL A:321 A:417 10.0 0.065 -85.8 -8.3 10.0 0.065 0.0 GOL
HOH
 8.665
4.228
 CG2
CG1
 C3
O
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 VAL A:275 A:417 6.0 0.039 -88.2 6.2 6.0 0.039 0.0 HOH
 4.123
 CA
 O
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 VAL E:275 E:417 9.0 0.058 -81.2 -1.9 9.0 0.058 0.0
VAL I:275 F:417 9.0 0.058 -82.7 -3.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 VAL A:417 A:417 9.0 0.058 -87.2 -0.5