Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 629605 . G A CCDS12036.1:NM_005035.3:c.757Cgg>Tgg_NP_005026.3:p.253R>W Homo sapiens RNA polymerase mitochondrial (POLRMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7a8p 1 O00411 99.91 0.0 EM
 2020-12-30 ARG A:166 A:253 137.0 0.609 H -62.4 -61.3 137.0 0.609 0.0
6erp 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:151 A:253 213.0 0.947 H -54.7 -53.4 213.0 0.947 0.0 DT
DT
 7.624
8.393
 CD
N
 OP1
OP1
ARG H:151 B:253 208.0 0.924 H -54.7 -52.8 NA NA NA
6erq 4 O00411 99.91 0.0 X-RAY
 2017-11-15 ARG G:151 A:253 214.0 0.951 H -53.3 -52.5 214.0 0.951 0.0 DG
DT
DT
 9.541
7.184
5.850
 C
CD
N
 O3'
OP1
OP1
ARG H:151 B:253 209.0 0.929 H -53.3 -51.3 NA NA NA
3spa 1 O00411 99.91 0.0 X-RAY
 2011-09-28 ARG A:157 A:253 194.0 0.862 H -53.1 -33.7 194.0 0.862 0.0
4boc 1 O00411 100.0 0.0 X-RAY
 2013-09-25 ARG A:111 A:253 215.0 0.956 H -46.3 -56.2 215.0 0.956 0.0 DG
DA
DC
DG
DT
DG
DG
DC
DG
 8.857
9.075
7.192
8.274
8.871
4.408
3.252
4.974
7.284
 NH2
NH1
NH1
NH1
NH1
NH1
NH1
CD
NH1
 OP2
N6
N4
O6
O3'
O3'
OP2
OP2
O6
5ola 2 O00411 99.91 0.0 X-RAY
 2017-10-18 ARG E:111 E:253 207.0 0.92 H -64.4 -51.3 207.0 0.92 0.0
ARG I:111 F:253 205.0 0.911 H -64.0 -51.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00411-f1 1 O00411 100.0 0.0 ARG A:253 A:253 202.0 0.898 H -46.6 -41.8