Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187455233 | . | C | A | CCDS2292.1:NM_002210.4:c.168ttC>ttA_NP_002201.1:p.56F>L | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | PHE | A:26 | A:26 | 14.0 | 0.067 | E | -118.9 | 115.4 | 14.0 | 0.067 | 0.0 | ||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | PHE | A:26 | A:26 | 14.0 | 0.067 | E | -113.3 | 114.7 | 14.0 | 0.067 | 0.0 | ||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | PHE | A:26 | A:26 | 15.0 | 0.071 | E | -112.4 | 116.8 | 15.0 | 0.071 | 0.0 | ||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | PHE | A:26 | A:26 | 27.0 | 0.129 | E | -114.7 | 116.7 | 27.0 | 0.129 | 0.0 | ||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | PHE | A:26 | A:26 | 21.0 | 0.1 | E | -113.6 | 108.6 | 21.0 | 0.1 | 0.0 | ||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | PHE | A:26 | A:26 | 18.0 | 0.086 | E | -116.0 | 110.1 | 18.0 | 0.086 | 0.0 | ||||||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | PHE | A:26 | A:26 | 35.0 | NA | E | -120.1 | 105.8 | 35.0 | NA | NA | ||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | PHE | A:26 | A:26 | 44.0 | 0.21 | E | -115.1 | 120.7 | 44.0 | 0.21 | 0.0 | ||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | PHE | A:26 | A:26 | 31.0 | 0.148 | E | -121.3 | 112.4 | 31.0 | 0.148 | 0.0 |
CL |
7.228 |
N |
CL |
||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | PHE | A:26 | A:26 | 20.0 | 0.095 | E | -111.3 | 112.1 | 20.0 | 0.095 | 0.0 |
HOH |
3.830 |
C |
O |
||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | PHE | A:26 | A:26 | 24.0 | 0.114 | E | -111.6 | 109.6 | 24.0 | 0.114 | 0.0 | ||||||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | PHE | A:26 | A:26 | 20.0 | 0.095 | E | -115.1 | 110.6 | 20.0 | 0.095 | 0.0 | ||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | PHE | A:26 | A:26 | 22.0 | 0.105 | E | -120.0 | 113.3 | 22.0 | 0.105 | 0.0 | ||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | PHE | A:26 | A:26 | 33.0 | NA | E | -103.0 | 119.1 | 33.0 | NA | NA | ||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | PHE | A:26 | A:26 | 34.0 | NA | E | -102.4 | 118.4 | 34.0 | NA | NA | ||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | PHE | A:26 | A:26 | 35.0 | NA | E | -108.2 | 117.5 | 35.0 | NA | NA | ||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | PHE | A:26 | A:26 | 22.0 | 0.105 | E | -101.6 | 125.0 | 22.0 | 0.105 | 0.0 | ||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | PHE | A:26 | A:26 | 15.0 | 0.071 | E | -113.3 | 101.7 | 15.0 | 0.071 | 0.0 | ||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | PHE | A:26 | A:26 | 18.0 | 0.086 | E | -113.5 | 108.3 | 18.0 | 0.086 | 0.0 | ||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | PHE | A:26 | A:26 | 28.0 | 0.133 | E | -112.8 | 127.2 | 28.0 | 0.133 | 0.0 | ||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | PHE | A:26 | A:26 | 23.0 | 0.11 | E | -127.5 | 108.6 | 23.0 | 0.11 | 0.0 | ||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | PHE | A:26 | A:26 | 23.0 | 0.11 | E | -135.2 | 113.5 | 23.0 | 0.11 | 0.0 | ||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | PHE | A:26 | A:26 | 23.0 | 0.11 | E | -135.2 | 104.0 | 23.0 | 0.11 | 0.0 |
HOH |
7.038 |
O |
O |
||
| PHE | C:26 | C:26 | 22.0 | 0.105 | E | -137.1 | 106.9 | NA | NA | NA | |||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | PHE | A:26 | A:26 | 22.0 | 0.105 | E | -140.7 | 113.1 | NA | NA | NA | ||||||
| PHE | C:26 | C:26 | 28.0 | 0.133 | E | -140.8 | 114.1 | 28.0 | 0.133 | 0.0 | |||||||||||||
| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | PHE | E:26 | A:26 | 23.0 | 0.11 | E | -126.6 | 105.3 | 23.0 | 0.11 | 0.0 | ||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | PHE | E:26 | A:26 | 24.0 | 0.114 | E | -126.7 | 105.3 | 24.0 | 0.114 | 0.0 | ||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | PHE | A:26 | A:26 | 29.0 | 0.138 | E | -144.9 | 112.8 | 29.0 | 0.138 | 0.0 |
HOH |
3.566 |
CD1 |
O |
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| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | PHE | A:26 | A:26 | 26.0 | 0.124 | E | -143.2 | 117.6 | 26.0 | 0.124 | 0.0 | ||||||
| PHE | E:26 | E:26 | 26.0 | 0.124 | E | -143.8 | 117.1 | 26.0 | 0.124 | 0.0 | |||||||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | PHE | A:26 | A:26 | 21.0 | 0.1 | E | -115.2 | 109.0 | 21.0 | 0.1 | 0.0 |
HOH |
2.999 |
HZ |
O |
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| PHE | C:26 | C:26 | 21.0 | 0.1 | E | -111.4 | 108.5 | NA | NA | NA | |||||||||||||
| PHE | E:26 | E:26 | 21.0 | 0.1 | E | -125.1 | 116.1 | NA | NA | NA | |||||||||||||
| PHE | G:26 | G:26 | 20.0 | 0.095 | E | -129.1 | 114.8 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | PHE | A:26 | A:26 | 21.0 | 0.1 | E | -150.5 | 109.3 | 21.0 | 0.1 | 0.0 |
HOH |
4.381 |
HA |
O |
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| PHE | C:26 | C:26 | 14.0 | 0.067 | E | -132.4 | 112.5 | 14.0 | 0.067 | 0.0 |
HOH |
3.335 |
HA |
O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | PHE | E:26 | A:26 | 25.0 | 0.119 | E | -126.7 | 105.3 | 25.0 | 0.119 | 0.0 | ||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | PHE | E:26 | A:26 | 19.0 | 0.09 | E | -153.1 | 133.5 | 19.0 | 0.09 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | PHE | A:56 | A:56 | 20.0 | 0.095 | E | -123.3 | 113.2 | |