Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187466831 | . | A | C | CCDS2292.1:NM_002210.4:c.269gAc>gCc_NP_002201.1:p.90D>A | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASP | A:60 | A:60 | 32.0 | 0.213 | -83.3 | -176.5 | 32.0 | 0.213 | 0.0 | |||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASP | A:60 | A:60 | 27.0 | 0.18 | -84.1 | -175.0 | 27.0 | 0.18 | 0.0 | |||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASP | A:60 | A:60 | 26.0 | 0.173 | -82.6 | -174.8 | 26.0 | 0.173 | 0.0 | |||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | ASP | A:60 | A:60 | 33.0 | 0.22 | E | -73.6 | 127.1 | 33.0 | 0.22 | 0.0 | ||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASP | A:60 | A:60 | 37.0 | 0.247 | E | -70.0 | 125.7 | 37.0 | 0.247 | 0.0 | ||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASP | A:60 | A:60 | 43.0 | 0.287 | -77.5 | 141.6 | 43.0 | 0.287 | 0.0 | |||||||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | ASP | A:60 | A:60 | 50.0 | NA | E | -67.9 | 138.3 | 50.0 | NA | NA | ||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | ASP | A:60 | A:60 | 26.0 | 0.173 | E | -75.5 | 126.2 | 26.0 | 0.173 | 0.0 | ||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASP | A:60 | A:60 | 24.0 | 0.16 | E | -74.3 | 118.5 | 24.0 | 0.16 | 0.0 | ||||||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASP | A:60 | A:60 | 21.0 | 0.14 | -71.1 | 151.0 | 21.0 | 0.14 | 0.0 |
HOH |
2.377 |
OD1 |
O |
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| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASP | A:60 | A:60 | 43.0 | 0.287 | E | -84.2 | 125.0 | 43.0 | 0.287 | 0.0 | ||||||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASP | A:60 | A:60 | 20.0 | 0.133 | E | -84.5 | 124.7 | 20.0 | 0.133 | 0.0 | ||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASP | A:60 | A:60 | 25.0 | 0.167 | E | -110.7 | 152.6 | 25.0 | 0.167 | 0.0 | ||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASP | A:60 | A:60 | 51.0 | NA | E | -73.8 | 117.9 | 51.0 | NA | NA | ||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASP | A:60 | A:60 | 51.0 | NA | E | -73.4 | 118.3 | 51.0 | NA | NA | ||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASP | A:60 | A:60 | 49.0 | NA | E | -74.6 | 119.5 | 49.0 | NA | NA | ||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | ASP | A:60 | A:60 | 15.0 | 0.1 | E | -87.7 | 133.3 | 15.0 | 0.1 | 0.0 | ||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | ASP | A:60 | A:60 | 21.0 | 0.14 | E | -96.9 | 110.1 | 21.0 | 0.14 | 0.0 | ||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | ASP | A:60 | A:60 | 16.0 | 0.107 | E | -93.8 | 128.9 | 16.0 | 0.107 | 0.0 | ||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | ASP | A:60 | A:60 | 12.0 | 0.08 | -91.7 | 151.1 | 12.0 | 0.08 | 0.0 | |||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | ASP | A:60 | A:60 | 26.0 | 0.173 | E | -104.9 | 149.7 | 26.0 | 0.173 | 0.0 | ||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | ASP | A:60 | A:60 | 23.0 | 0.153 | E | -111.5 | 159.9 | 23.0 | 0.153 | 0.0 | ||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ASP | A:60 | A:60 | 45.0 | 0.3 | E | -84.0 | 141.0 | 45.0 | 0.3 | 0.0 |
HOH |
2.385 |
OD1 |
O |
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| ASP | C:60 | C:60 | 46.0 | 0.307 | E | -83.8 | 141.0 | NA | NA | NA | |||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ASP | A:60 | A:60 | 30.0 | 0.2 | E | -100.4 | 139.0 | NA | NA | NA | ||||||
| ASP | C:60 | C:60 | 35.0 | 0.233 | E | -100.1 | 136.8 | 35.0 | 0.233 | 0.0 | |||||||||||||
| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ASP | E:60 | A:60 | 39.0 | 0.26 | E | -66.0 | 115.5 | 39.0 | 0.26 | 0.0 | ||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ASP | E:60 | A:60 | 39.0 | 0.26 | E | -66.0 | 115.6 | 39.0 | 0.26 | 0.0 | ||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ASP | A:60 | A:60 | 22.0 | 0.147 | E | -99.0 | 144.6 | 22.0 | 0.147 | 0.0 | ||||||
| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ASP | A:60 | A:60 | 47.0 | 0.313 | E | -99.7 | 138.8 | 47.0 | 0.313 | 0.0 | ||||||
| ASP | E:60 | E:60 | 29.0 | 0.193 | E | -99.2 | 134.9 | 29.0 | 0.193 | 0.0 | |||||||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ASP | A:60 | A:60 | 36.0 | 0.24 | -58.5 | 150.9 | 36.0 | 0.24 | 0.0 |
HOH |
3.242 |
OD1 |
O |
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| ASP | C:60 | C:60 | 19.0 | 0.127 | E | -78.9 | 142.7 | NA | NA | NA | |||||||||||||
| ASP | E:60 | E:60 | 18.0 | 0.12 | -110.1 | 156.0 | NA | NA | NA | ||||||||||||||
| ASP | G:60 | G:60 | 39.0 | 0.26 | E | -86.3 | 141.3 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ASP | A:60 | A:60 | 45.0 | 0.3 | B | -94.1 | 148.2 | 45.0 | 0.3 | 0.0 |
HOH |
3.398 |
O |
O |
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| ASP | C:60 | C:60 | 52.0 | 0.347 | E | -88.2 | 133.9 | 52.0 | 0.347 | 0.0 |
HOH |
2.789 |
HB2 |
O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ASP | E:58 | A:60 | 38.0 | 0.253 | E | -66.0 | 115.5 | 38.0 | 0.253 | 0.0 | ||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ASP | E:58 | A:60 | 23.0 | 0.153 | E | -88.2 | 118.3 | 23.0 | 0.153 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | ASP | A:90 | A:90 | 21.0 | 0.14 | E | -72.9 | 119.2 | |