Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187466842 | . | A | C | CCDS2292.1:NM_002210.4:c.280Acc>Ccc_NP_002201.1:p.94T>P | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | THR | A:64 | A:64 | 63.0 | 0.45 | S | -98.0 | -179.5 | 63.0 | 0.45 | 0.0 | ||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | THR | A:64 | A:64 | 57.0 | 0.407 | S | -88.1 | 178.0 | 57.0 | 0.407 | 0.0 | ||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | THR | A:64 | A:64 | 55.0 | 0.393 | S | -94.5 | -178.8 | 55.0 | 0.393 | 0.0 | ||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | THR | A:64 | A:64 | 79.0 | 0.564 | 28.1 | 90.5 | 79.0 | 0.564 | 0.0 | |||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | THR | A:64 | A:64 | 80.0 | 0.571 | T | 66.1 | -5.8 | 80.0 | 0.571 | 0.0 | ||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | THR | A:64 | A:64 | 106.0 | 0.757 | T | 70.9 | -13.7 | 106.0 | 0.757 | 0.0 | ||||||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | THR | A:64 | A:64 | 82.0 | NA | 43.2 | 51.6 | 59.0 | NA | NA |
D:None:NA C:None:NA |
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| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | THR | A:64 | A:64 | 116.0 | 0.829 | S | -55.3 | 123.8 | 116.0 | 0.829 | 0.0 | ||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | THR | A:64 | A:64 | 92.0 | 0.657 | S | -57.4 | 143.3 | 92.0 | 0.657 | 0.0 | ||||||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | THR | A:64 | A:64 | 90.0 | 0.643 | S | -44.1 | 120.8 | 90.0 | 0.643 | 0.0 |
HOH |
7.748 |
O |
O |
||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | THR | A:64 | A:64 | 100.0 | 0.714 | T | 66.3 | -13.5 | 100.0 | 0.714 | 0.0 | ||||||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | THR | A:64 | A:64 | 114.0 | 0.814 | T | 65.1 | -7.9 | 114.0 | 0.814 | 0.0 | ||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | THR | A:64 | A:64 | 88.0 | 0.629 | S | -72.2 | -15.6 | 88.0 | 0.629 | 0.0 | ||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | THR | A:64 | A:64 | 64.0 | NA | 47.4 | 45.1 | 64.0 | NA | NA | |||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | THR | A:64 | A:64 | 66.0 | NA | 45.0 | 48.3 | 66.0 | NA | NA | |||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | THR | A:64 | A:64 | 66.0 | NA | 45.0 | 48.7 | 66.0 | NA | NA | |||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | THR | A:64 | A:64 | 92.0 | 0.657 | T | -142.9 | -41.4 | 92.0 | 0.657 | 0.0 | ||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | THR | A:64 | A:64 | 89.0 | 0.636 | T | -96.1 | -45.3 | 89.0 | 0.636 | 0.0 | ||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | THR | A:64 | A:64 | 84.0 | 0.6 | T | -102.3 | -31.9 | 84.0 | 0.6 | 0.0 | ||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | THR | A:64 | A:64 | 94.0 | 0.671 | S | -62.6 | -32.4 | 94.0 | 0.671 | 0.0 | ||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | THR | A:64 | A:64 | 81.0 | 0.579 | T | -75.4 | -18.2 | 81.0 | 0.579 | 0.0 | ||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | THR | A:64 | A:64 | 86.0 | 0.614 | S | -77.2 | -17.5 | 86.0 | 0.614 | 0.0 | ||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | THR | A:64 | A:64 | 73.0 | 0.521 | S | -64.7 | 156.8 | 73.0 | 0.521 | 0.0 |
HOH |
6.632 |
O |
O |
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| THR | C:64 | C:64 | 62.0 | 0.443 | S | -65.2 | 158.4 | NA | NA | NA | |||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | THR | A:64 | A:64 | 75.0 | 0.536 | S | -52.7 | 158.2 | NA | NA | NA | ||||||
| THR | C:64 | C:64 | 75.0 | 0.536 | S | -52.4 | 156.9 | 75.0 | 0.536 | 0.0 | |||||||||||||
| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | THR | E:64 | A:64 | 69.0 | 0.493 | S | -65.2 | 170.8 | 69.0 | 0.493 | 0.0 | ||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | THR | E:64 | A:64 | 71.0 | 0.507 | S | -65.3 | 170.8 | 71.0 | 0.507 | 0.0 | ||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | THR | A:64 | A:64 | 123.0 | 0.879 | S | -64.7 | 120.9 | 123.0 | 0.879 | 0.0 | ||||||
| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | THR | A:64 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| THR | E:64 | E:64 | 87.0 | 0.621 | T | 75.6 | -23.1 | 43.0 | 0.307 | 0.314 |
C:P01137:0.314 |
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| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | THR | A:64 | A:64 | 73.0 | 0.521 | S | -75.3 | 156.4 | 73.0 | 0.521 | 0.0 |
HOH |
2.898 |
O |
O |
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| THR | C:64 | C:64 | 78.0 | 0.557 | S | -84.0 | 136.6 | NA | NA | NA | |||||||||||||
| THR | E:64 | E:64 | 93.0 | 0.664 | 63.4 | 179.7 | NA | NA | NA | ||||||||||||||
| THR | G:64 | G:64 | 66.0 | 0.471 | S | -70.4 | 129.1 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | THR | A:64 | A:64 | 60.0 | 0.429 | S | -62.9 | 164.2 | 60.0 | 0.429 | 0.0 |
HOH |
3.162 |
O |
O |
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| THR | C:64 | C:64 | 76.0 | 0.543 | S | -56.0 | 163.7 | 76.0 | 0.543 | 0.0 |
HOH |
4.384 |
O |
O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | THR | E:62 | A:64 | 71.0 | 0.507 | S | -65.2 | 170.8 | 71.0 | 0.507 | 0.0 | ||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | THR | E:62 | A:64 | 59.0 | 0.421 | S | -123.2 | 147.0 | 59.0 | 0.421 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | THR | A:94 | A:94 | 93.0 | 0.664 | T | -83.9 | -16.1 | |