Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187466849 . G A CCDS2292.1:NM_002210.4:c.287cGg>cAg_NP_002201.1:p.96R>Q Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 ARG A:66 A:66 162.0 0.72 -126.6 150.3 162.0 0.72 0.0
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 ARG A:66 A:66 166.0 0.738 -133.3 146.7 166.0 0.738 0.0
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 ARG A:66 A:66 167.0 0.742 -134.3 144.1 167.0 0.742 0.0
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 ARG A:66 A:66 145.0 0.644 -71.9 147.5 145.0 0.644 0.0
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 ARG A:66 A:66 154.0 0.684 -81.9 124.4 154.0 0.684 0.0
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 ARG A:66 A:66 126.0 0.56 -101.7 133.8 126.0 0.56 0.0
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 ARG A:66 A:66 71.0 NA -121.7 145.2 63.0 NA NA C:None:NA
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 ARG A:66 A:66 63.0 NA S 62.4 -148.1 63.0 NA NA
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 ARG A:66 A:66 164.0 0.729 E -137.3 125.6 164.0 0.729 0.0 HOH
 7.921
 NH1
 O
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 ARG A:66 A:66 141.0 0.627 -93.5 136.8 141.0 0.627 0.0 HOH
 4.560
 O
 O
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ARG A:66 A:66 151.0 0.671 -84.9 136.7 151.0 0.671 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ARG A:66 A:66 130.0 0.578 -76.0 154.5 130.0 0.578 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ARG A:66 A:66 141.0 0.627 -106.8 146.5 141.0 0.627 0.0
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 ARG A:66 A:66 86.0 NA -52.1 128.7 86.0 NA NA
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 ARG A:66 A:66 85.0 NA -53.4 130.0 85.0 NA NA
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 ARG A:66 A:66 85.0 NA -55.7 132.4 85.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 ARG A:66 A:66 166.0 0.738 -75.8 112.1 166.0 0.738 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 ARG A:66 A:66 144.0 0.64 -76.6 140.6 144.0 0.64 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 ARG A:66 A:66 148.0 0.658 -100.7 131.3 148.0 0.658 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 ARG A:66 A:66 135.0 0.6 -98.2 154.2 135.0 0.6 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 ARG A:66 A:66 147.0 0.653 -98.9 133.2 147.0 0.653 0.0
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 ARG A:66 A:66 146.0 0.649 -108.2 134.3 146.0 0.649 0.0
4um8 1 P06756 99.66 0.0 X-RAY
 2014-11-12 ARG A:66 A:66 151.0 0.671 -80.3 142.1 151.0 0.671 0.0 HOH
 7.143
 O
 O
ARG C:66 C:66 152.0 0.676 -79.5 141.7 NA NA NA
4um9 1 P06756 99.66 0.0 X-RAY
 2014-11-12 ARG A:66 A:66 145.0 0.644 -118.0 120.8 NA NA NA
ARG C:66 C:66 151.0 0.671 -117.1 119.0 151.0 0.671 0.0
5ner 5 P06756 99.83 0.0 EM
 2017-06-21 ARG E:66 A:66 154.0 0.684 -94.0 133.3 154.0 0.684 0.0
5net 5 P06756 99.83 0.0 EM
 2017-06-21 ARG E:66 A:66 152.0 0.676 -94.0 133.4 152.0 0.676 0.0
5ffg 1 P06756 99.5 0.0 X-RAY
 2017-01-25 ARG A:66 A:66 201.0 0.893 44.0 77.8 201.0 0.893 0.0
5ffo 1 P06756 99.5 0.0 X-RAY
 2017-01-25 ARG A:66 A:66 197.0 0.876 -91.3 154.9 197.0 0.876 0.0
ARG E:66 E:66 192.0 0.853 -90.8 137.0 123.0 0.547 0.306 C:P01137:0.307
6om1 1 P06756 99.33 0.0 X-RAY
 2019-12-11 ARG A:66 A:66 170.0 0.756 -66.3 134.3 170.0 0.756 0.0 HOH
 2.073
 HH22
 O
ARG C:66 C:66 123.0 0.547 -69.2 143.4 NA NA NA
ARG E:66 E:66 151.0 0.671 -102.7 132.6 NA NA NA
ARG G:66 G:66 174.0 0.773 -82.2 159.2 NA NA NA
6om2 1 P06756 99.33 0.0 X-RAY
 2019-12-11 ARG A:66 A:66 184.0 0.818 -91.5 135.4 184.0 0.818 0.0 HOH
 5.837
 H
 O
ARG C:66 C:66 168.0 0.747 -119.1 135.2 168.0 0.747 0.0 HOH
 4.872
 O
 O
5nem 5 P06756 99.16 0.0 EM
 2017-06-21 ARG E:64 A:66 155.0 0.689 -93.9 133.3 155.0 0.689 0.0
5neu 5 P06756 99.16 0.0 EM
 2017-06-21 ARG E:64 A:66 140.0 0.622 E -121.8 89.3 140.0 0.622 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 ARG A:96 A:96 155.0 0.689 -84.5 128.3