Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187487068 | . | A | C | CCDS2292.1:NM_002210.4:c.319Aat>Cat_NP_002201.1:p.107N>H | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASN | A:77 | A:77 | 56.0 | 0.35 | -87.6 | 115.5 | 56.0 | 0.35 | 0.0 | |||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASN | A:77 | A:77 | 52.0 | 0.325 | -92.0 | 114.9 | 52.0 | 0.325 | 0.0 | |||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | ASN | A:77 | A:77 | 53.0 | 0.331 | -84.5 | 127.7 | 53.0 | 0.331 | 0.0 | |||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | ASN | A:77 | A:77 | 51.0 | 0.319 | -76.2 | 142.8 | 51.0 | 0.319 | 0.0 | |||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASN | A:77 | A:77 | 44.0 | 0.275 | -90.1 | 130.4 | 44.0 | 0.275 | 0.0 | |||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | ASN | A:77 | A:77 | 49.0 | 0.306 | -80.0 | 119.4 | 49.0 | 0.306 | 0.0 | |||||||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | ASN | A:77 | A:77 | 65.0 | NA | -85.7 | 133.4 | 65.0 | NA | NA | |||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | ASN | A:77 | A:77 | 54.0 | 0.338 | -78.2 | 137.7 | 54.0 | 0.338 | 0.0 | |||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASN | A:77 | A:77 | 44.0 | 0.275 | -81.2 | 120.1 | 44.0 | 0.275 | 0.0 |
SO4 HOH |
3.114 5.221 |
ND2 N |
O3 O |
|||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | ASN | A:77 | A:77 | 48.0 | 0.3 | -72.3 | 126.3 | 48.0 | 0.3 | 0.0 |
HOH |
2.701 |
N |
O |
|||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASN | A:77 | A:77 | 41.0 | 0.256 | -90.7 | -83.6 | 41.0 | 0.256 | 0.0 | |||||||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASN | A:77 | A:77 | 46.0 | 0.287 | -75.2 | 131.6 | 46.0 | 0.287 | 0.0 | |||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | ASN | A:77 | A:77 | 49.0 | 0.306 | -81.5 | 127.6 | 49.0 | 0.306 | 0.0 | |||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASN | A:77 | A:77 | 46.0 | NA | S | -59.8 | 140.9 | 46.0 | NA | NA | ||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASN | A:77 | A:77 | 45.0 | NA | S | -60.1 | 141.3 | 45.0 | NA | NA | ||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | ASN | A:77 | A:77 | 46.0 | NA | S | -60.5 | 141.8 | 46.0 | NA | NA | ||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | ASN | A:77 | A:77 | 37.0 | 0.231 | -76.9 | 121.9 | 37.0 | 0.231 | 0.0 | |||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | ASN | A:77 | A:77 | 46.0 | 0.287 | -78.8 | 134.7 | 46.0 | 0.287 | 0.0 | |||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | ASN | A:77 | A:77 | 46.0 | 0.287 | -80.5 | 119.9 | 46.0 | 0.287 | 0.0 | |||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | ASN | A:77 | A:77 | 45.0 | 0.281 | -86.0 | 123.3 | 45.0 | 0.281 | 0.0 | |||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | ASN | A:77 | A:77 | 50.0 | 0.312 | -84.0 | 119.6 | 50.0 | 0.312 | 0.0 | |||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | ASN | A:77 | A:77 | 51.0 | 0.319 | -84.3 | 127.3 | 51.0 | 0.319 | 0.0 | |||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ASN | A:77 | A:77 | 45.0 | 0.281 | -77.0 | 120.4 | 45.0 | 0.281 | 0.0 |
CL HOH |
3.064 9.879 |
ND2 ND2 |
CL O |
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| ASN | C:77 | C:77 | 46.0 | 0.287 | -76.8 | 121.0 | NA | NA | NA | ||||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | ASN | A:77 | A:77 | 52.0 | 0.325 | -78.5 | 119.3 | NA | NA | NA | |||||||
| ASN | C:77 | C:77 | 54.0 | 0.338 | -78.4 | 119.4 | 54.0 | 0.338 | 0.0 |
SO4 HOH |
3.067 6.787 |
ND2 N |
O3 O |
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| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ASN | E:77 | A:77 | 46.0 | 0.287 | -76.3 | 114.6 | 46.0 | 0.287 | 0.0 | |||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | ASN | E:77 | A:77 | 46.0 | 0.287 | -76.3 | 114.5 | 46.0 | 0.287 | 0.0 | |||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ASN | A:77 | A:77 | 56.0 | 0.35 | -82.1 | 119.5 | 56.0 | 0.35 | 0.0 |
HOH |
3.037 |
ND2 |
O |
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| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | ASN | A:77 | A:77 | 52.0 | 0.325 | -81.6 | 119.4 | 52.0 | 0.325 | 0.0 | |||||||
| ASN | E:77 | E:77 | 52.0 | 0.325 | -81.2 | 119.5 | 52.0 | 0.325 | 0.0 | ||||||||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ASN | A:77 | A:77 | 50.0 | 0.312 | -76.0 | 124.9 | 50.0 | 0.312 | 0.0 |
HOH |
2.222 |
HD21 |
O |
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| ASN | C:77 | C:77 | 46.0 | 0.287 | -76.8 | 108.4 | NA | NA | NA | ||||||||||||||
| ASN | E:77 | E:77 | 52.0 | 0.325 | -83.0 | 113.8 | NA | NA | NA | ||||||||||||||
| ASN | G:77 | G:77 | 46.0 | 0.287 | -77.4 | 117.9 | NA | NA | NA | ||||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | ASN | A:77 | A:77 | 49.0 | 0.306 | -90.9 | 103.2 | 49.0 | 0.306 | 0.0 |
HOH |
7.204 |
OD1 |
O |
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| ASN | C:77 | C:77 | 58.0 | 0.362 | -78.8 | 125.0 | 58.0 | 0.362 | 0.0 |
MAN HOH |
9.849 2.313 |
HD21 HD21 |
O4 O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ASN | E:75 | A:77 | 46.0 | 0.287 | -76.3 | 114.6 | 46.0 | 0.287 | 0.0 | |||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | ASN | E:75 | A:77 | 59.0 | 0.369 | -69.9 | 111.9 | 59.0 | 0.369 | 0.0 | |||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | ASN | A:107 | A:107 | 52.0 | 0.325 | -71.2 | 136.9 | ||