Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187487076 . T A CCDS2292.1:NM_002210.4:c.327gaT>gaA_NP_002201.1:p.109D>E Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 ASP A:79 A:79 97.0 0.647 E -77.7 150.2 97.0 0.647 0.0
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 ASP A:79 A:79 92.0 0.613 E -80.4 151.3 92.0 0.613 0.0
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 ASP A:79 A:79 106.0 0.707 E -88.4 148.1 106.0 0.707 0.0
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 ASP A:79 A:79 88.0 0.587 E -125.2 124.0 88.0 0.587 0.0
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 ASP A:79 A:79 80.0 0.533 E -113.4 141.7 80.0 0.533 0.0
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 ASP A:79 A:79 86.0 0.573 B -121.2 144.0 86.0 0.573 0.0
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 ASP A:79 A:79 72.0 NA E -94.7 153.6 72.0 NA NA
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 ASP A:79 A:79 105.0 0.7 E -114.3 121.7 105.0 0.7 0.0
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 ASP A:79 A:79 100.0 0.667 E -112.0 135.0 100.0 0.667 0.0 SO4
HOH
 9.359
7.290
 OD1
OD2
 O1
O
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 ASP A:79 A:79 96.0 0.64 E -108.0 138.4 96.0 0.64 0.0 HOH
 3.207
 O
 O
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ASP A:79 A:79 102.0 0.68 E -132.9 125.8 102.0 0.68 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ASP A:79 A:79 85.0 0.567 E -113.2 134.0 85.0 0.567 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ASP A:79 A:79 96.0 0.64 E -113.2 139.7 96.0 0.64 0.0
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 ASP A:79 A:79 66.0 NA -96.8 173.5 66.0 NA NA
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 ASP A:79 A:79 65.0 NA -96.3 173.8 65.0 NA NA
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 ASP A:79 A:79 65.0 NA -94.3 174.6 65.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 ASP A:79 A:79 87.0 0.58 E -122.5 148.8 87.0 0.58 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 ASP A:79 A:79 82.0 0.547 E -107.2 158.6 82.0 0.547 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 ASP A:79 A:79 92.0 0.613 E -106.6 161.9 92.0 0.613 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 ASP A:79 A:79 87.0 0.58 B -107.3 155.6 87.0 0.58 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 ASP A:79 A:79 93.0 0.62 E -108.5 136.6 93.0 0.62 0.0
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 ASP A:79 A:79 96.0 0.64 E -109.6 132.8 96.0 0.64 0.0
4um8 1 P06756 99.66 0.0 X-RAY
 2014-11-12 ASP A:79 A:79 90.0 0.6 E -111.1 134.9 90.0 0.6 0.0 CL
HOH
 9.957
8.634
 OD2
OD2
 CL
O
ASP C:79 C:79 94.0 0.627 E -111.3 133.9 NA NA NA
4um9 1 P06756 99.66 0.0 X-RAY
 2014-11-12 ASP A:79 A:79 93.0 0.62 E -95.3 132.7 NA NA NA
ASP C:79 C:79 91.0 0.607 E -95.0 132.8 91.0 0.607 0.0 SO4
HOH
 9.059
8.794
 OD1
OD2
 O1
O
5ner 5 P06756 99.83 0.0 EM
 2017-06-21 ASP E:79 A:79 88.0 0.587 E -105.6 142.2 88.0 0.587 0.0
5net 5 P06756 99.83 0.0 EM
 2017-06-21 ASP E:79 A:79 87.0 0.58 E -105.5 142.2 87.0 0.58 0.0
5ffg 1 P06756 99.5 0.0 X-RAY
 2017-01-25 ASP A:79 A:79 95.0 0.633 E -96.2 129.6 95.0 0.633 0.0 HOH
 2.919
 OD1
 O
5ffo 1 P06756 99.5 0.0 X-RAY
 2017-01-25 ASP A:79 A:79 97.0 0.647 E -97.0 131.6 97.0 0.647 0.0
ASP E:79 E:79 96.0 0.64 E -97.2 131.5 96.0 0.64 0.0
6om1 1 P06756 99.33 0.0 X-RAY
 2019-12-11 ASP A:79 A:79 94.0 0.627 E -96.4 136.7 94.0 0.627 0.0 HOH
 2.866
 OD2
 O
ASP C:79 C:79 96.0 0.64 E -100.4 141.9 NA NA NA
ASP E:79 E:79 89.0 0.593 E -97.8 140.8 NA NA NA
ASP G:79 G:79 97.0 0.647 E -107.9 137.3 NA NA NA
6om2 1 P06756 99.33 0.0 X-RAY
 2019-12-11 ASP A:79 A:79 97.0 0.647 E -113.5 125.3 97.0 0.647 0.0 HOH
 3.477
 O
 O
ASP C:79 C:79 88.0 0.587 E -116.5 134.2 88.0 0.587 0.0 HOH
 5.011
 H
 O
5nem 5 P06756 99.16 0.0 EM
 2017-06-21 ASP E:77 A:79 87.0 0.58 E -105.6 142.2 87.0 0.58 0.0
5neu 5 P06756 99.16 0.0 EM
 2017-06-21 ASP E:77 A:79 91.0 0.607 B -127.3 166.4 91.0 0.607 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 ASP A:109 A:109 100.0 0.667 E -103.9 135.3