Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187490204 | . | G | A | CCDS2292.1:NM_002210.4:c.413tGt>tAt_NP_002201.1:p.138C>Y | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -117.3 | 157.1 | 0.0 | 0.0 | 0.0 | ||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -115.4 | 158.1 | 0.0 | 0.0 | 0.0 | ||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -115.2 | 157.6 | 0.0 | 0.0 | 0.0 | ||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -132.1 | 150.2 | 0.0 | 0.0 | 0.0 | ||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -131.3 | 159.6 | 0.0 | 0.0 | 0.0 | ||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -133.7 | 163.6 | 0.0 | 0.0 | 0.0 | ||||||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | CYS | A:108 | A:108 | 6.0 | NA | E | -134.3 | 159.8 | 6.0 | NA | NA | ||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -132.1 | 150.3 | 0.0 | 0.0 | 0.0 | ||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -129.9 | 159.5 | 0.0 | 0.0 | 0.0 |
HOH |
7.457 |
O |
O |
||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -130.9 | 156.5 | 0.0 | 0.0 | 0.0 |
HOH |
6.880 |
O |
O |
||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -130.1 | 155.7 | 0.0 | 0.0 | 0.0 | ||||||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -123.9 | 158.6 | 0.0 | 0.0 | 0.0 | ||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -130.1 | 155.3 | 0.0 | 0.0 | 0.0 | ||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | CYS | A:108 | A:108 | 7.0 | NA | E | -111.0 | 151.3 | 7.0 | NA | NA | ||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | CYS | A:108 | A:108 | 6.0 | NA | E | -110.8 | 151.1 | 6.0 | NA | NA | ||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | CYS | A:108 | A:108 | 6.0 | NA | E | -105.0 | 150.1 | 6.0 | NA | NA | ||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -124.7 | 167.4 | 0.0 | 0.0 | 0.0 | ||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -143.1 | 159.8 | 0.0 | 0.0 | 0.0 | ||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -117.0 | 167.3 | 0.0 | 0.0 | 0.0 | ||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -111.5 | 160.9 | 0.0 | 0.0 | 0.0 | ||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -129.2 | 160.8 | 0.0 | 0.0 | 0.0 | ||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -135.3 | 164.2 | 0.0 | 0.0 | 0.0 | ||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -134.2 | 160.6 | 0.0 | 0.0 | 0.0 |
HOH |
7.741 |
O |
O |
||
| CYS | C:108 | C:108 | 0.0 | 0.0 | E | -133.7 | 160.9 | NA | NA | NA | |||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -134.1 | 158.5 | NA | NA | NA | ||||||
| CYS | C:108 | C:108 | 0.0 | 0.0 | E | -134.1 | 158.2 | 0.0 | 0.0 | 0.0 |
HOH |
7.810 |
N |
O |
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| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | CYS | E:108 | A:108 | 0.0 | 0.0 | E | -139.0 | 158.5 | 0.0 | 0.0 | 0.0 | ||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | CYS | E:108 | A:108 | 0.0 | 0.0 | E | -139.0 | 158.5 | 0.0 | 0.0 | 0.0 | ||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -136.1 | 157.8 | 0.0 | 0.0 | 0.0 |
HOH |
5.035 |
SG |
O |
||
| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -135.6 | 159.2 | 0.0 | 0.0 | 0.0 | ||||||
| CYS | E:108 | E:108 | 0.0 | 0.0 | E | -136.5 | 159.3 | 0.0 | 0.0 | 0.0 | |||||||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -142.8 | 145.8 | 0.0 | 0.0 | 0.0 |
EDO HOH |
6.734 8.724 |
O O |
O1 O |
||
| CYS | C:108 | C:108 | 0.0 | 0.0 | E | -133.2 | 150.7 | NA | NA | NA | |||||||||||||
| CYS | E:108 | E:108 | 0.0 | 0.0 | E | -140.4 | 146.8 | NA | NA | NA | |||||||||||||
| CYS | G:108 | G:108 | 0.0 | 0.0 | E | -143.0 | 143.4 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | CYS | A:108 | A:108 | 0.0 | 0.0 | E | -137.1 | 168.3 | 0.0 | 0.0 | 0.0 |
HOH |
7.581 |
HA |
O |
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| CYS | C:108 | C:108 | 0.0 | 0.0 | E | -140.5 | 149.7 | 0.0 | 0.0 | 0.0 |
HOH |
6.978 |
HB2 |
O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | CYS | E:106 | A:108 | 0.0 | 0.0 | E | -139.0 | 158.5 | 0.0 | 0.0 | 0.0 | ||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | CYS | E:106 | A:108 | 0.0 | 0.0 | E | -85.0 | 169.8 | 0.0 | 0.0 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | CYS | A:138 | A:138 | 0.0 | 0.0 | E | -124.3 | 156.9 | |