Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187490223 . G A CCDS2292.1:NM_002210.4:c.432tgG>tgA_NP_002201.1:p.144W>* Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 TRP A:114 A:114 1.0 0.004 E -150.1 164.1 1.0 0.004 0.0
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 TRP A:114 A:114 1.0 0.004 E -149.4 164.4 1.0 0.004 0.0
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 TRP A:114 A:114 2.0 0.008 E -148.0 166.9 2.0 0.008 0.0
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 TRP A:114 A:114 7.0 0.027 E -143.3 119.1 7.0 0.027 0.0
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 TRP A:114 A:114 2.0 0.008 E -146.5 133.8 2.0 0.008 0.0
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 TRP A:114 A:114 2.0 0.008 E -141.4 124.0 2.0 0.008 0.0
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 TRP A:114 A:114 41.0 NA E -137.3 143.4 41.0 NA NA
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 TRP A:114 A:114 6.0 0.024 E -141.5 124.6 6.0 0.024 0.0 NO3
 9.323
 CH2
 O2
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 TRP A:114 A:114 1.0 0.004 E -150.3 146.5 1.0 0.004 0.0 SO4
NI
HOH
 9.263
6.376
8.849
 N
CH2
CB
 O3
NI
O
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 TRP A:114 A:114 4.0 0.016 E -144.7 132.7 4.0 0.016 0.0 HOH
 3.233
 CD1
 O
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 TRP A:114 A:114 2.0 0.008 -119.6 -64.5 2.0 0.008 0.0
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 TRP A:114 A:114 2.0 0.008 -120.5 -74.9 2.0 0.008 0.0
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 TRP A:114 A:114 2.0 0.008 B -128.0 152.4 2.0 0.008 0.0
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 TRP A:114 A:114 33.0 NA E -115.4 157.2 33.0 NA NA
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 TRP A:114 A:114 34.0 NA E -117.9 157.6 34.0 NA NA
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 TRP A:114 A:114 32.0 NA E -115.8 156.4 32.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 TRP A:114 A:114 2.0 0.008 E -124.9 141.3 2.0 0.008 0.0
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 TRP A:114 A:114 2.0 0.008 E -145.0 128.7 2.0 0.008 0.0
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 TRP A:114 A:114 1.0 0.004 E -138.5 117.3 1.0 0.004 0.0
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 TRP A:114 A:114 1.0 0.004 E -135.0 140.6 1.0 0.004 0.0
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 TRP A:114 A:114 1.0 0.004 B -137.0 149.5 1.0 0.004 0.0
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 TRP A:114 A:114 2.0 0.008 B -139.4 152.4 2.0 0.008 0.0
4um8 1 P06756 99.66 0.0 X-RAY
 2014-11-12 TRP A:114 A:114 3.0 0.012 E -143.8 140.8 3.0 0.012 0.0 CL
HOH
 9.588
6.634
 N
O
 CL
O
TRP C:114 C:114 1.0 0.004 E -144.2 139.7 NA NA NA
4um9 1 P06756 99.66 0.0 X-RAY
 2014-11-12 TRP A:114 A:114 2.0 0.008 E -139.9 171.6 NA NA NA
TRP C:114 C:114 3.0 0.012 E -141.2 167.5 3.0 0.012 0.0 SO4
HOH
 9.099
2.712
 N
NE1
 O3
O
5ner 5 P06756 99.83 0.0 EM
 2017-06-21 TRP E:114 A:114 3.0 0.012 E -143.0 130.7 3.0 0.012 0.0
5net 5 P06756 99.83 0.0 EM
 2017-06-21 TRP E:114 A:114 3.0 0.012 E -143.0 130.8 3.0 0.012 0.0
5ffg 1 P06756 99.5 0.0 X-RAY
 2017-01-25 TRP A:114 A:114 1.0 0.004 E -141.5 170.8 1.0 0.004 0.0 HOH
 2.837
 NE1
 O
5ffo 1 P06756 99.5 0.0 X-RAY
 2017-01-25 TRP A:114 A:114 2.0 0.008 E -140.8 136.0 2.0 0.008 0.0
TRP E:114 E:114 1.0 0.004 E -140.8 135.3 1.0 0.004 0.0
6om1 1 P06756 99.33 0.0 X-RAY
 2019-12-11 TRP A:114 A:114 2.0 0.008 E -143.9 154.4 2.0 0.008 0.0 HOH
 6.511
 HH2
 O
TRP C:114 C:114 1.0 0.004 E -141.8 158.8 NA NA NA
TRP E:114 E:114 2.0 0.008 E -137.5 156.3 NA NA NA
TRP G:114 G:114 2.0 0.008 E -138.1 153.9 NA NA NA
6om2 1 P06756 99.33 0.0 X-RAY
 2019-12-11 TRP A:114 A:114 1.0 0.004 E -147.4 166.6 1.0 0.004 0.0 HOH
 8.357
 HD1
 O
TRP C:114 C:114 1.0 0.004 E -143.5 167.1 1.0 0.004 0.0 HOH
 6.609
 C
 O
5nem 5 P06756 99.16 0.0 EM
 2017-06-21 TRP E:112 A:114 4.0 0.016 E -143.0 130.8 4.0 0.016 0.0
5neu 5 P06756 99.16 0.0 EM
 2017-06-21 TRP E:112 A:114 1.0 0.004 E -158.9 125.2 1.0 0.004 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 TRP A:144 A:144 4.0 0.016 E -127.7 140.2