Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr2 187503144 . T A CCDS2292.1:NM_002210.4:c.855atT>atA_NP_002201.1:p.285I>I Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6uja 1 P06756 99.9 0.0 EM
 2020-02-05 ILE A:255 A:255 0.0 0.0 E -120.0 122.0 0.0 0.0 0.0 NAG
CA
 6.052
7.515
 O
CG2
 C8
CA
6ujb 1 P06756 99.9 0.0 EM
 2020-02-05 ILE A:255 A:255 0.0 0.0 E -119.9 121.5 0.0 0.0 0.0 NAG
CA
 5.844
7.519
 O
CG2
 C8
CA
6ujc 1 P06756 99.9 0.0 EM
 2020-02-05 ILE A:255 A:255 0.0 0.0 E -119.3 121.8 0.0 0.0 0.0 NAG
CA
 5.691
7.504
 O
CG2
 C8
CA
3ije 1 P06756 99.9 0.0 X-RAY
 2009-09-29 ILE A:255 A:255 0.0 0.0 E -123.2 121.8 0.0 0.0 0.0 NAG
NAG
CA
 6.011
9.578
8.527
 O
O
CG2
 C8
O7
CA
6msl 1 P06756 99.9 0.0 X-RAY
 2019-10-23 ILE A:255 A:255 0.0 0.0 E -113.4 117.2 0.0 0.0 0.0 NAG
NAG
MN
 6.186
9.577
8.138
 O
O
CG2
 C8
O7
MN
6msu 1 P06756 99.9 0.0 X-RAY
 2019-10-23 ILE A:255 A:255 0.0 0.0 E -119.0 123.1 0.0 0.0 0.0 NAG
NAG
MN
 6.205
9.465
8.028
 O
O
CG2
 C8
O7
MN
6djp 1 P06756 99.9 0.0 EM
 2018-07-25 ILE A:255 A:255 20.0 NA E -123.3 122.6 20.0 NA NA NAG
 5.744
 O
 C8
4o02 1 P06756 99.9 0.0 X-RAY
 2014-04-02 ILE A:255 A:255 4.0 0.023 E -122.1 121.7 4.0 0.023 0.0 NAG
NAG
MN
 5.285
9.259
8.630
 O
O
CG2
 O7
O7
MN
4g1e 1 P06756 99.9 0.0 X-RAY
 2012-12-12 ILE A:255 A:255 2.0 0.011 E -120.9 122.3 2.0 0.011 0.0 NAG
NAG
CA
HOH
 6.546
9.415
8.217
8.870
 N
O
CG2
CG2
 C1
O7
CA
O
4g1m 1 P06756 99.9 0.0 X-RAY
 2012-12-12 ILE A:255 A:255 0.0 0.0 E -127.6 118.7 0.0 0.0 0.0 NAG
NAG
CA
HOH
 6.485
9.527
8.172
2.732
 O
O
CG2
O
 C8
O7
CA
O
4mmx 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ILE A:255 A:255 0.0 0.0 E -122.9 119.4 0.0 0.0 0.0 NAG
NAG
MN
 6.449
9.481
8.165
 O
O
CG2
 C8
O7
MN
4mmy 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ILE A:255 A:255 0.0 0.0 E -120.0 117.2 0.0 0.0 0.0 NAG
NAG
MN
 6.532
9.612
7.851
 O
O
CG2
 C8
O7
MN
4mmz 1 P06756 99.9 0.0 X-RAY
 2014-03-26 ILE A:255 A:255 0.0 0.0 E -119.5 113.0 0.0 0.0 0.0 NAG
NAG
MN
 6.721
9.610
7.829
 N
O
CG2
 C1
O7
MN
6avq 1 P06756 100.0 0.0 EM
 2017-11-01 ILE A:255 A:255 17.0 NA E -109.6 119.8 17.0 NA NA
6avr 1 P06756 100.0 0.0 EM
 2017-11-01 ILE A:255 A:255 17.0 NA E -110.0 120.3 17.0 NA NA
6avu 1 P06756 100.0 0.0 EM
 2017-11-01 ILE A:255 A:255 18.0 NA E -111.1 124.0 18.0 NA NA
1jv2 1 14743192 99.9 0.0 X-RAY
 2001-10-17 ILE A:255 A:255 0.0 0.0 E -130.4 98.6 0.0 0.0 0.0 NAG
NAG
CA
 6.138
9.944
8.339
 O
N
CG2
 O7
O7
CA
1l5g 1 14743192 99.9 0.0 X-RAY
 2002-04-17 ILE A:255 A:255 0.0 0.0 E -120.9 123.9 0.0 0.0 0.0 NAG
NAG
MN
 5.903
9.495
8.744
 O
O
CG2
 C8
O7
MN
1m1x 1 14743192 99.9 0.0 X-RAY
 2002-08-14 ILE A:255 A:255 0.0 0.0 E -116.2 131.6 0.0 0.0 0.0 NAG
NAG
MN
 6.049
9.355
8.468
 O
O
CG2
 O7
O7
MN
1u8c 1 P06756 99.9 0.0 X-RAY
 2004-12-28 ILE A:255 A:255 1.0 0.006 E -123.7 103.8 1.0 0.006 0.0 NAG
NAG
NAG
CA
 6.953
9.896
9.493
8.890
 O
N
O
CG2
 C8
O7
O3
CA
6mk0 1 P06756 99.9 0.0 X-RAY
 2019-09-25 ILE A:255 A:255 0.0 0.0 E -119.5 119.2 0.0 0.0 0.0 NAG
NAG
MN
 6.245
9.491
7.652
 O
O
CG2
 C8
O7
MN
6naj 1 P06756 99.9 0.0 X-RAY
 2019-12-11 ILE A:255 A:255 0.0 0.0 E -124.3 108.3 0.0 0.0 0.0 NAG
NAG
MN
 6.698
9.516
7.758
 O
O
CG2
 N2
O7
MN
4um8 1 P06756 99.66 0.0 X-RAY
 2014-11-12 ILE A:255 A:255 1.0 0.006 E -126.8 113.9 1.0 0.006 0.0 MAN
NAG
NAG
CA
HOH
 9.973
6.253
9.839
7.968
6.908
 O
O
O
CG2
CD1
 O4
N2
O7
CA
O
ILE C:255 C:255 0.0 0.0 E -126.3 112.6 NA NA NA
4um9 1 P06756 99.66 0.0 X-RAY
 2014-11-12 ILE A:255 A:255 0.0 0.0 E -116.9 125.7 NA NA NA
ILE C:255 C:255 0.0 0.0 E -116.6 125.5 0.0 0.0 0.0 NAG
NAG
CA
HOH
 6.258
9.482
8.024
8.705
 O
O
CG2
CG2
 N2
O7
CA
O
5ner 5 P06756 99.83 0.0 EM
 2017-06-21 ILE E:255 A:255 5.0 0.029 E -124.7 116.6 5.0 0.029 0.0 NAG
NAG
CA
 9.609
7.174
8.006
 O
O
CG2
 C1
C1
CA
5net 5 P06756 99.83 0.0 EM
 2017-06-21 ILE E:255 A:255 6.0 0.034 E -124.8 116.5 6.0 0.034 0.0 NAG
NAG
CA
 8.800
6.917
8.006
 O
O
CG2
 N2
C1
CA
5ffg 1 P06756 99.5 0.0 X-RAY
 2017-01-25 ILE A:255 A:255 0.0 0.0 E -118.6 125.6 0.0 0.0 0.0 NAG
NAG
CA
HOH
 6.458
9.557
7.887
6.194
 O
O
CG2
O
 C8
C8
CA
O
5ffo 1 P06756 99.5 0.0 X-RAY
 2017-01-25 ILE A:255 A:255 0.0 0.0 E -116.3 125.9 0.0 0.0 0.0 MAN
NAG
NAG
CA
 8.945
6.063
8.589
8.151
 CG2
O
O
CG2
 O4
N2
C8
CA
ILE E:255 E:255 0.0 0.0 E -115.5 125.2 0.0 0.0 0.0 MAN
NAG
NAG
CA
 8.853
6.066
8.534
8.160
 CG2
O
O
CG2
 O4
N2
C8
CA
6om1 1 P06756 99.33 0.0 X-RAY
 2019-12-11 ILE A:255 A:255 0.0 0.0 E -124.8 119.9 0.0 0.0 0.0 NAG
NAG
CA
HOH
 6.430
9.042
7.408
5.830
 H
H
HG22
HD12
 C1
O7
CA
O
ILE C:255 C:255 0.0 0.0 E -132.3 113.8 NA NA NA
ILE E:255 E:255 1.0 0.006 E -129.8 115.6 NA NA NA
ILE G:255 G:255 0.0 0.0 E -135.8 112.6 NA NA NA
6om2 1 P06756 99.33 0.0 X-RAY
 2019-12-11 ILE A:255 A:255 0.0 0.0 E -117.4 120.9 0.0 0.0 0.0 MAN
NAG
NAG
CA
HOH
 9.327
5.753
9.524
7.487
6.397
 HG21
O
H
HG22
HD12
 O3
C8
O7
CA
O
ILE C:255 C:255 0.0 0.0 E -120.0 128.9 0.0 0.0 0.0 NAG
NAG
NAG
NAG
CA
HOH
 6.819
8.192
6.209
9.764
7.180
4.778
 O
HG22
O
O
HG22
HD12
 O6
O7
C8
O7
CA
O
5nem 5 P06756 99.16 0.0 EM
 2017-06-21 ILE E:253 A:255 4.0 0.023 E -124.7 116.5 4.0 0.023 0.0 NAG
NAG
CA
 8.800
6.917
8.006
 O
O
CG2
 N2
C1
CA
5neu 5 P06756 99.16 0.0 EM
 2017-06-21 ILE E:253 A:255 0.0 0.0 E -90.1 108.2 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p06756-f1 1 P06756 99.9 0.0 ILE A:285 A:285 0.0 0.0 E -112.0 126.4