Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr2 | 187506229 | . | C | A | CCDS2292.1:NM_002210.4:c.1073aCg>aAg_NP_002201.1:p.358T>K | Homo sapiens integrin subunit alpha V (ITGAV), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6uja | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | THR | A:328 | A:328 | 72.0 | 0.514 | E | -109.0 | 134.2 | 72.0 | 0.514 | 0.0 | ||||||
| 6ujb | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | THR | A:328 | A:328 | 70.0 | 0.5 | E | -109.1 | 132.9 | 70.0 | 0.5 | 0.0 | ||||||
| 6ujc | 1 | P06756 | 99.9 | 0.0 |
EM |
2020-02-05 | THR | A:328 | A:328 | 82.0 | 0.586 | E | -102.7 | 133.3 | 82.0 | 0.586 | 0.0 | ||||||
| 3ije | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2009-09-29 | THR | A:328 | A:328 | 63.0 | 0.45 | E | -97.0 | 148.9 | 63.0 | 0.45 | 0.0 | ||||||
| 6msl | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | THR | A:328 | A:328 | 60.0 | 0.429 | E | -115.0 | 130.4 | 60.0 | 0.429 | 0.0 | ||||||
| 6msu | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-10-23 | THR | A:328 | A:328 | 62.0 | 0.443 | E | -111.5 | 121.7 | 62.0 | 0.443 | 0.0 | ||||||
| 6djp | 1 | P06756 | 99.9 | 0.0 |
EM |
2018-07-25 | THR | A:328 | A:328 | 88.0 | NA | E | -153.7 | 155.2 | 88.0 | NA | NA | ||||||
| 4o02 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-04-02 | THR | A:328 | A:328 | 83.0 | 0.593 | E | -96.5 | 148.4 | 83.0 | 0.593 | 0.0 | ||||||
| 4g1e | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | THR | A:328 | A:328 | 62.0 | 0.443 | E | -116.6 | 143.5 | 62.0 | 0.443 | 0.0 |
CL HOH |
7.326 5.120 |
O O |
CL O |
||
| 4g1m | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2012-12-12 | THR | A:328 | A:328 | 65.0 | 0.464 | E | -110.0 | 133.3 | 65.0 | 0.464 | 0.0 | ||||||
| 4mmx | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | THR | A:328 | A:328 | 65.0 | 0.464 | E | -107.4 | 132.3 | 65.0 | 0.464 | 0.0 | ||||||
| 4mmy | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | THR | A:328 | A:328 | 67.0 | 0.479 | E | -111.5 | 131.8 | 67.0 | 0.479 | 0.0 | ||||||
| 4mmz | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2014-03-26 | THR | A:328 | A:328 | 64.0 | 0.457 | E | -109.6 | 129.5 | 64.0 | 0.457 | 0.0 | ||||||
| 6avq | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | THR | A:328 | A:328 | 94.0 | NA | E | -146.6 | 149.3 | 94.0 | NA | NA | ||||||
| 6avr | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | THR | A:328 | A:328 | 94.0 | NA | E | -147.1 | 149.2 | 94.0 | NA | NA | ||||||
| 6avu | 1 | P06756 | 100.0 | 0.0 |
EM |
2017-11-01 | THR | A:328 | A:328 | 94.0 | NA | E | -146.7 | 149.1 | 94.0 | NA | NA | ||||||
| 1jv2 | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2001-10-17 | THR | A:328 | A:328 | 53.0 | 0.379 | E | -75.1 | 147.4 | 53.0 | 0.379 | 0.0 | ||||||
| 1l5g | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-04-17 | THR | A:328 | A:328 | 63.0 | 0.45 | E | -100.7 | 154.1 | 63.0 | 0.45 | 0.0 | ||||||
| 1m1x | 1 | 14743192 | 99.9 | 0.0 |
X-RAY |
2002-08-14 | THR | A:328 | A:328 | 61.0 | 0.436 | E | -79.1 | 127.8 | 61.0 | 0.436 | 0.0 | ||||||
| 1u8c | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2004-12-28 | THR | A:328 | A:328 | 59.0 | 0.421 | E | -87.1 | 166.7 | 59.0 | 0.421 | 0.0 | ||||||
| 6mk0 | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-09-25 | THR | A:328 | A:328 | 60.0 | 0.429 | E | -114.9 | 131.9 | 60.0 | 0.429 | 0.0 | ||||||
| 6naj | 1 | P06756 | 99.9 | 0.0 |
X-RAY |
2019-12-11 | THR | A:328 | A:328 | 65.0 | 0.464 | E | -104.4 | 127.0 | 65.0 | 0.464 | 0.0 | ||||||
| 4um8 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | THR | A:328 | A:328 | 62.0 | 0.443 | E | -72.4 | 128.5 | 62.0 | 0.443 | 0.0 |
HOH |
4.495 |
OG1 |
O |
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| THR | C:328 | C:328 | 68.0 | 0.486 | E | -73.5 | 127.3 | NA | NA | NA | |||||||||||||
| 4um9 | 1 | P06756 | 99.66 | 0.0 |
X-RAY |
2014-11-12 | THR | A:328 | A:328 | 69.0 | 0.493 | E | -104.0 | 133.0 | NA | NA | NA | ||||||
| THR | C:328 | C:328 | 61.0 | 0.436 | E | -104.1 | 132.9 | 61.0 | 0.436 | 0.0 |
HOH |
5.910 |
C |
O |
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| 5ner | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | THR | E:328 | A:328 | 68.0 | 0.486 | E | -84.1 | 124.9 | 68.0 | 0.486 | 0.0 | ||||||
| 5net | 5 | P06756 | 99.83 | 0.0 |
EM |
2017-06-21 | THR | E:328 | A:328 | 66.0 | 0.471 | E | -84.2 | 124.9 | 66.0 | 0.471 | 0.0 | ||||||
| 5ffg | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | THR | A:328 | A:328 | 60.0 | 0.429 | E | -106.2 | 132.3 | 60.0 | 0.429 | 0.0 |
HOH |
2.787 |
N |
O |
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| 5ffo | 1 | P06756 | 99.5 | 0.0 |
X-RAY |
2017-01-25 | THR | A:328 | A:328 | 64.0 | 0.457 | E | -105.5 | 130.5 | 64.0 | 0.457 | 0.0 | ||||||
| THR | E:328 | E:328 | 70.0 | 0.5 | E | -104.9 | 130.2 | 70.0 | 0.5 | 0.0 | |||||||||||||
| 6om1 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | THR | A:328 | A:328 | 63.0 | 0.45 | E | -100.6 | 135.7 | 63.0 | 0.45 | 0.0 |
HOH |
5.569 |
O |
O |
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| THR | C:328 | C:328 | 63.0 | 0.45 | E | -99.7 | 135.1 | NA | NA | NA | |||||||||||||
| THR | E:328 | E:328 | 64.0 | 0.457 | E | -97.3 | 138.2 | NA | NA | NA | |||||||||||||
| THR | G:328 | G:328 | 71.0 | 0.507 | E | -103.2 | 133.3 | NA | NA | NA | |||||||||||||
| 6om2 | 1 | P06756 | 99.33 | 0.0 |
X-RAY |
2019-12-11 | THR | A:328 | A:328 | 64.0 | 0.457 | E | -102.2 | 130.4 | 64.0 | 0.457 | 0.0 |
HOH |
3.628 |
HG23 |
O |
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| THR | C:328 | C:328 | 68.0 | 0.486 | E | -115.5 | 129.4 | 68.0 | 0.486 | 0.0 |
PEG HOH |
7.951 2.998 |
N HB |
C4 O |
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| 5nem | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | THR | E:326 | A:328 | 67.0 | 0.479 | E | -84.1 | 124.9 | 67.0 | 0.479 | 0.0 | ||||||
| 5neu | 5 | P06756 | 99.16 | 0.0 |
EM |
2017-06-21 | THR | E:326 | A:328 | 71.0 | 0.507 | E | -92.6 | 127.4 | 71.0 | 0.507 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p06756-f1 | 1 | P06756 | 99.9 | 0.0 | THR | A:358 | A:358 | 67.0 | 0.479 | E | -92.8 | 133.3 | |